Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000166 | molecular_function | nucleotide binding |
A | 0003676 | molecular_function | nucleic acid binding |
A | 0003677 | molecular_function | DNA binding |
A | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
A | 0006260 | biological_process | DNA replication |
A | 0006261 | biological_process | DNA-templated DNA replication |
A | 0006287 | biological_process | base-excision repair, gap-filling |
A | 0006297 | biological_process | nucleotide-excision repair, DNA gap filling |
A | 0008296 | molecular_function | 3'-5'-DNA exonuclease activity |
A | 0009432 | biological_process | SOS response |
A | 0045004 | biological_process | DNA replication proofreading |
A | 0046872 | molecular_function | metal ion binding |
A | 0071897 | biological_process | DNA biosynthetic process |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 16 |
Details | binding site for residue 9O7 A 801 |
Chain | Residue |
A | ASP404 |
A | GLU580 |
A | MG802 |
A | MG803 |
P | 9O412 |
P | MG101 |
T | DT4 |
T | DT5 |
A | PHE405 |
A | SER407 |
A | ARG460 |
A | LYS487 |
A | ASN491 |
A | THR541 |
A | ASP542 |
A | GLU578 |
site_id | AC2 |
Number of Residues | 3 |
Details | binding site for residue MG A 802 |
Chain | Residue |
A | TYR402 |
A | ASP542 |
A | 9O7801 |
site_id | AC3 |
Number of Residues | 3 |
Details | binding site for residue MG A 803 |
Chain | Residue |
A | GLU578 |
A | GLU580 |
A | 9O7801 |
site_id | AC4 |
Number of Residues | 3 |
Details | binding site for residue MG P 101 |
Chain | Residue |
A | LYS487 |
A | 9O7801 |
P | 9O412 |
Functional Information from PROSITE/UniProt
site_id | PS00116 |
Number of Residues | 9 |
Details | DNA_POLYMERASE_B DNA polymerase family B signature. YSDTDGFFA |
Chain | Residue | Details |
A | TYR538-ALA546 | |