5VPF
Transcription factor FosB/JunD bZIP domain in complex with cognate DNA, type-II crystal
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003677 | molecular_function | DNA binding |
A | 0003700 | molecular_function | DNA-binding transcription factor activity |
A | 0006355 | biological_process | regulation of DNA-templated transcription |
A | 0006357 | biological_process | regulation of transcription by RNA polymerase II |
B | 0003677 | molecular_function | DNA binding |
B | 0003700 | molecular_function | DNA-binding transcription factor activity |
B | 0006355 | biological_process | regulation of DNA-templated transcription |
C | 0003677 | molecular_function | DNA binding |
C | 0003700 | molecular_function | DNA-binding transcription factor activity |
C | 0006355 | biological_process | regulation of DNA-templated transcription |
C | 0006357 | biological_process | regulation of transcription by RNA polymerase II |
D | 0003677 | molecular_function | DNA binding |
D | 0003700 | molecular_function | DNA-binding transcription factor activity |
D | 0006355 | biological_process | regulation of DNA-templated transcription |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | binding site for residue EDO A 301 |
Chain | Residue |
A | ARG173 |
B | ARG286 |
F | DA9 |
F | EDO101 |
site_id | AC2 |
Number of Residues | 3 |
Details | binding site for residue EDO A 302 |
Chain | Residue |
A | GLU191 |
A | LYS194 |
B | LYS299 |
site_id | AC3 |
Number of Residues | 2 |
Details | binding site for residue EDO A 303 |
Chain | Residue |
A | GLN184 |
A | ASP188 |
site_id | AC4 |
Number of Residues | 4 |
Details | binding site for residue CL A 304 |
Chain | Residue |
A | ARG161 |
A | ARG164 |
E | DC4 |
E | DG5 |
site_id | AC5 |
Number of Residues | 3 |
Details | binding site for residue EDO B 401 |
Chain | Residue |
A | GLU212 |
B | ARG279 |
B | SER283 |
site_id | AC6 |
Number of Residues | 5 |
Details | binding site for residue CL B 402 |
Chain | Residue |
B | ASN278 |
B | ALA281 |
F | DG5 |
F | DG6 |
F | HOH208 |
site_id | AC7 |
Number of Residues | 1 |
Details | binding site for residue NA B 403 |
Chain | Residue |
B | SER283 |
site_id | AC8 |
Number of Residues | 2 |
Details | binding site for residue EDO E 101 |
Chain | Residue |
E | DA17 |
E | DC18 |
site_id | AC9 |
Number of Residues | 9 |
Details | binding site for residue EDO F 101 |
Chain | Residue |
A | EDO301 |
B | ALA282 |
B | CYS285 |
B | ARG286 |
B | LYS289 |
E | DT11 |
F | DT7 |
F | DG8 |
F | DA9 |
site_id | AD1 |
Number of Residues | 4 |
Details | binding site for residue EDO C 301 |
Chain | Residue |
C | ARG173 |
D | ARG286 |
H | DG8 |
H | DA9 |
site_id | AD2 |
Number of Residues | 5 |
Details | binding site for residue PO4 C 302 |
Chain | Residue |
C | GLN184 |
C | ASP188 |
C | GLU191 |
D | LEU296 |
D | LYS299 |
site_id | AD3 |
Number of Residues | 4 |
Details | binding site for residue EDO D 401 |
Chain | Residue |
D | SER283 |
D | ARG286 |
G | DA9 |
G | DC10 |
site_id | AD4 |
Number of Residues | 3 |
Details | binding site for residue PO4 G 101 |
Chain | Residue |
G | DG16 |
G | DA17 |
G | DC18 |
Functional Information from PROSITE/UniProt
site_id | PS00036 |
Number of Residues | 15 |
Details | BZIP_BASIC Basic-leucine zipper (bZIP) domain signature. Rre.RNKlAAAKcRNR |
Chain | Residue | Details |
A | ARG161-ARG175 | |
B | ARG273-ARG288 |