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5VNA

Crystal structure of human YEATS domain

Functional Information from GO Data
ChainGOidnamespacecontents
A0006355biological_processregulation of DNA-templated transcription
B0006355biological_processregulation of DNA-templated transcription
C0006355biological_processregulation of DNA-templated transcription
D0006355biological_processregulation of DNA-templated transcription
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue SO4 A 201
ChainResidue
ATHR48
ATYR50
ALYS52
AGLU87

site_idAC2
Number of Residues4
Detailsbinding site for residue EDO B 201
ChainResidue
BHIS43
BSER73
BTYR74
BHOH366

site_idAC3
Number of Residues3
Detailsbinding site for residue EDO B 202
ChainResidue
BGLY42
BHOH338
BLYS37

site_idAC4
Number of Residues4
Detailsbinding site for residue EDO B 203
ChainResidue
BTYR33
BEDO204
BHOH304
BHOH312

site_idAC5
Number of Residues2
Detailsbinding site for residue EDO B 204
ChainResidue
BEDO203
BHOH318

site_idAC6
Number of Residues2
Detailsbinding site for residue EDO B 205
ChainResidue
BHOH339
BHOH384

site_idAC7
Number of Residues5
Detailsbinding site for residue EDO B 206
ChainResidue
BGLY94
BGLU95
BPHE121
BHOH375
DNHE202

site_idAC8
Number of Residues6
Detailsbinding site for residue SO4 B 207
ChainResidue
ALYS131
AHOH303
BLYS131
BLYS132
BTHR133
BHOH332

site_idAC9
Number of Residues5
Detailsbinding site for residue SO4 B 208
ChainResidue
BTYR50
BLYS52
BGLU87
BHOH313
BHOH316

site_idAD1
Number of Residues4
Detailsbinding site for residue SO4 C 201
ChainResidue
CVAL80
CVAL81
CTHR82
CLYS83

site_idAD2
Number of Residues3
Detailsbinding site for residue SO4 C 202
ChainResidue
BASN126
BLYS131
CHOH334

site_idAD3
Number of Residues7
Detailsbinding site for residue SO4 D 201
ChainResidue
BARG32
BPHE34
DARG32
DLYS131
DLYS132
DTHR133
DHOH324

site_idAD4
Number of Residues11
Detailsbinding site for residue NHE D 202
ChainResidue
AARG15
BHIS71
BTRP93
BGLY94
BGLU95
BPHE96
BEDO206
DGLU97
DTYR115
DHOH302
DHOH309

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsSITE: Interacts with diacetylated histone H3 => ECO:0000269|PubMed:29900004, ECO:0000269|PubMed:30071723, ECO:0007744|PDB:5VNB, ECO:0007744|PDB:5XTZ
ChainResidueDetails
ASER73
BSER73
CSER73
DSER73

site_idSWS_FT_FI2
Number of Residues8
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
ALYS37
BLYS37
CLYS37
DLYS37

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PDB entries from 2024-07-31

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