5VNA
Crystal structure of human YEATS domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 110 |
Detector technology | CCD |
Collection date | 2016-08-24 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.97872 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 70.158, 79.926, 121.643 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.400 - 2.100 |
R-factor | 0.17631 |
Rwork | 0.174 |
R-free | 0.22228 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3qrl |
RMSD bond length | 0.020 |
RMSD bond angle | 1.957 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.180 |
High resolution limit [Å] | 2.100 | 2.100 |
Number of reflections | 40747 | 4052 |
<I/σ(I)> | 27.12 | 3 |
Completeness [%] | 99.6 | 99.9 |
Redundancy | 7.2 | 6.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 9.4 | 290 | 1.24 M ammonium sulfate, 100 mM CHES pH 9.4 |