Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5VKC

Crystal structure of MCL-1 in complex with a BIM competitive inhibitor

Functional Information from GO Data
ChainGOidnamespacecontents
A0042981biological_processregulation of apoptotic process
B0042981biological_processregulation of apoptotic process
Functional Information from PDB Data
site_idAC1
Number of Residues15
Detailsbinding site for residue 9EA A 401
ChainResidue
AHIS224
APHE319
AZN403
AHOH506
AHOH509
AHOH512
BHIS320
AALA227
AMET250
AVAL253
AGLY262
AARG263
ATHR266
ALEU267
APHE270

site_idAC2
Number of Residues4
Detailsbinding site for residue ZN A 402
ChainResidue
AHIS224
AGLU288
AHOH506
AHOH529

site_idAC3
Number of Residues4
Detailsbinding site for residue ZN A 403
ChainResidue
A9EA401
BHIS320
BHOH537
BHOH550

site_idAC4
Number of Residues3
Detailsbinding site for residue ZN A 404
ChainResidue
AHIS252
AASP256
AHOH537

site_idAC5
Number of Residues5
Detailsbinding site for residue ZN A 405
ChainResidue
AARG248
AHIS252
AHOH515
BGLU292
BASP296

site_idAC6
Number of Residues2
Detailsbinding site for residue ZN A 406
ChainResidue
AASP242
BASP241

site_idAC7
Number of Residues2
Detailsbinding site for residue ZN A 407
ChainResidue
AASP241
BASP242

site_idAC8
Number of Residues4
Detailsbinding site for residue ZN A 408
ChainResidue
AHIS320
AHOH540
B9EA401
BHOH541

site_idAC9
Number of Residues16
Detailsbinding site for residue 9EA B 401
ChainResidue
AHIS320
AZN408
BHIS224
BALA227
BMET250
BVAL253
BGLY262
BARG263
BTHR266
BLEU267
BPHE270
BPHE319
BHOH502
BHOH518
BHOH538
BHOH541

site_idAD1
Number of Residues4
Detailsbinding site for residue ZN B 402
ChainResidue
BHIS224
BGLU288
BHOH518
BHOH543

site_idAD2
Number of Residues5
Detailsbinding site for residue ZN B 403
ChainResidue
AGLU292
AASP296
BARG248
BHIS252
BHOH532

site_idAD3
Number of Residues4
Detailsbinding site for residue ZN B 404
ChainResidue
AGLU322
BHIS252
BASP256
BHOH533

Functional Information from PROSITE/UniProt
site_idPS01080
Number of Residues20
DetailsBH1 Apoptosis regulator, Bcl-2 family BH1 motif signature. VFsDGvtNWGRIVTLIsFGA
ChainResidueDetails
AVAL253-ALA272

site_idPS01258
Number of Residues12
DetailsBH2 Apoptosis regulator, Bcl-2 family BH2 motif signature. WLvkqRGWDgFV
ChainResidueDetails
ATRP305-VAL316

site_idPS01259
Number of Residues15
DetailsBH3 Apoptosis regulator, Bcl-2 family BH3 motif signature. AletLRrVGDGVQRN
ChainResidueDetails
AALA209-ASN223

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues28
DetailsMotif: {"description":"BH3"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues40
DetailsMotif: {"description":"BH1"}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues30
DetailsMotif: {"description":"BH2"}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues4
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)"}
ChainResidueDetails

247536

PDB entries from 2026-01-14

PDB statisticsPDBj update infoContact PDBjnumon