Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5VDC

Crystal structure of the human DPF2 tandem PHD finger domain

Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 201
ChainResidue
ACYS4
ACYS7
AHIS34
ACYS37

site_idAC2
Number of Residues4
Detailsbinding site for residue ZN A 202
ChainResidue
ACYS26
ACYS29
ACYS55
ACYS58

site_idAC3
Number of Residues4
Detailsbinding site for residue ZN A 203
ChainResidue
ACYS79
ACYS102
ACYS105
ACYS76

site_idAC4
Number of Residues4
Detailsbinding site for residue ZN A 204
ChainResidue
ACYS61
ACYS64
AHIS84
ACYS87

site_idAC5
Number of Residues5
Detailsbinding site for residue GOL A 205
ChainResidue
APHE6
ACYS55
AILE56
AHOH310
AHOH317

site_idAC6
Number of Residues2
Detailsbinding site for residue GOL A 206
ChainResidue
APRO90
ASER91

site_idAC7
Number of Residues9
Detailsbinding site for residue EDO A 207
ChainResidue
AILE63
AHIS103
ALEU104
AHOH301
AHOH306
AHOH308
AHOH314
AHOH350
AHOH351

site_idAC8
Number of Residues6
Detailsbinding site for residue EDO A 208
ChainResidue
AARG52
AGLN54
ACYS61
AASN62
AHOH312
AHOH373

site_idAC9
Number of Residues10
Detailsbinding site for residue EDO A 209
ChainResidue
AGLY98
ASER99
ASER114
AILE115
AILE115
ATYR116
ATYR116
AGLN117
AHOH302
AHOH302

Functional Information from PROSITE/UniProt
site_idPS01359
Number of Residues80
DetailsZF_PHD_1 Zinc finger PHD-type signature. CsdCgrsghpsclqftpvmmaavktyrwqcieckccnicgtsenddql.LfCdd..Cdrg.YHmyCltpsmseppegs.................................WsChlC
ChainResidueDetails
ACYS26-CYS105

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues60
DetailsZN_FING: PHD-type 1 => ECO:0000255|PROSITE-ProRule:PRU00146
ChainResidueDetails
AASN1-CYS61

site_idSWS_FT_FI2
Number of Residues50
DetailsZN_FING: PHD-type 2 => ECO:0000255|PROSITE-ProRule:PRU00146
ChainResidueDetails
ACYS58-LEU108

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:23186163
ChainResidueDetails
ASER11

site_idSWS_FT_FI4
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
ALYS12

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon