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5VBP

CRYSTAL STRUCTURE OF THE FIRST BROMODOMAIN OF HUMAN BRD4 IN COMPLEX WITH RO3280

Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue EDO A 201
ChainResidue
AILE100
AILE101
ALYS102
ATHR103
AASN135

site_idAC2
Number of Residues2
Detailsbinding site for residue PEG A 203
ChainResidue
ATRP81
A79C204

site_idAC3
Number of Residues16
Detailsbinding site for residue 79C A 204
ChainResidue
APHE83
AVAL87
ALEU92
ALEU94
ATYR97
ATYR139
AASN140
APEG203
AHOH303
AHOH310
AHOH374
AHOH376
BILE146
B79C204
ATRP81
APRO82

site_idAC4
Number of Residues5
Detailsbinding site for residue EDO B 201
ChainResidue
BILE100
BILE101
BLYS102
BTHR103
BASN135

site_idAC5
Number of Residues5
Detailsbinding site for residue DMS B 203
ChainResidue
BASP144
BASP145
BHOH374
BHOH383
BHOH412

site_idAC6
Number of Residues14
Detailsbinding site for residue 79C B 204
ChainResidue
A79C204
BTRP81
BPRO82
BPHE83
BVAL87
BLEU92
BLEU94
BTYR97
BTYR139
BASN140
BHOH309
BHOH345
BHOH379
BHOH385

Functional Information from PROSITE/UniProt
site_idPS00633
Number of Residues60
DetailsBROMODOMAIN_1 Bromodomain signature. AwpFqqpvDavklnlpDYYkiIktpMdmgtIkkrlenny..Ywnaqeciqdfnt.MftNCyiY
ChainResidueDetails
AALA80-TYR139

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues212
DetailsDomain: {"description":"Bromo 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU00035","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues2
DetailsSite: {"description":"Acetylated histone binding","evidences":[{"source":"PubMed","id":"22464331","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues4
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"PubMed","id":"28112733","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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