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5VA8

Crystal Structure of Short-chain dehydrogenase/reductase SDR from Burkholderia phymatum in complex with NADP

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
B0000166molecular_functionnucleotide binding
C0000166molecular_functionnucleotide binding
D0000166molecular_functionnucleotide binding
Functional Information from PDB Data
site_idAC1
Number of Residues35
Detailsbinding site for residue NAP A 301
ChainResidue
AALA14
AASP65
AILE66
ATHR67
AASN88
AALA89
AGLY90
AGLY91
ATHR139
AARG157
APRO183
ASER16
AGLY184
AILE185
APHE186
ATHR188
AARG190
AILE191
ATCE302
AHOH414
AHOH430
AHOH436
ALYS17
AHOH437
AHOH462
AHOH497
AHOH557
AHOH573
AHOH587
AGLY18
ALEU19
AALA38
AARG39
ATHR40
ACYS64

site_idAC2
Number of Residues13
Detailsbinding site for residue TCE A 302
ChainResidue
ASER140
ASER141
ASER153
AARG157
AGLY184
ATHR194
AARG213
ANAP301
AHOH424
AHOH438
AHOH460
AHOH505
AHOH544

site_idAC3
Number of Residues8
Detailsbinding site for residue MPO A 303
ChainResidue
APRO94
AASN99
ATHR101
AASP103
AASP104
AARG107
AHOH415
AHOH528

site_idAC4
Number of Residues32
Detailsbinding site for residue NAP B 301
ChainResidue
BALA14
BSER16
BLYS17
BGLY18
BLEU19
BALA38
BARG39
BTHR40
BCYS64
BASP65
BILE66
BASN88
BALA89
BGLY90
BGLY91
BTHR139
BARG157
BPRO183
BGLY184
BILE185
BPHE186
BTHR188
BILE191
BTCE302
BHOH411
BHOH419
BHOH446
BHOH453
BHOH473
BHOH478
BHOH523
BHOH600

site_idAC5
Number of Residues16
Detailsbinding site for residue TCE B 302
ChainResidue
BHOH415
BHOH428
BHOH436
BHOH478
BHOH508
BSER140
BSER141
BILE147
BLEU150
BSER153
BARG157
BGLY184
BILE191
BTHR194
BARG213
BNAP301

site_idAC6
Number of Residues35
Detailsbinding site for residue NAP C 301
ChainResidue
CALA14
CSER16
CLYS17
CGLY18
CLEU19
CALA38
CARG39
CTHR40
CCYS64
CASP65
CILE66
CTHR67
CASN88
CALA89
CGLY90
CGLY91
CTHR139
CARG157
CPRO183
CGLY184
CILE185
CPHE186
CTHR188
CARG190
CILE191
CTCE302
CHOH409
CHOH422
CHOH426
CHOH463
CHOH468
CHOH487
CHOH521
CHOH551
CHOH613

site_idAC7
Number of Residues14
Detailsbinding site for residue TCE C 302
ChainResidue
CSER140
CSER141
CSER153
CARG157
CGLY184
CTHR194
CARG213
CNAP301
CHOH431
CHOH433
CHOH484
CHOH521
CHOH533
CHOH540

site_idAC8
Number of Residues9
Detailsbinding site for residue MPO C 303
ChainResidue
CPRO93
CPRO94
CASN99
CTHR101
CASP104
CARG107
CHOH408
CHOH432
CHOH630

site_idAC9
Number of Residues33
Detailsbinding site for residue NAP D 301
ChainResidue
DALA14
DSER16
DLYS17
DGLY18
DLEU19
DALA38
DARG39
DTHR40
DCYS64
DASP65
DILE66
DTHR67
DASN88
DALA89
DGLY90
DGLY91
DTHR139
DARG157
DPRO183
DGLY184
DILE185
DPHE186
DTHR188
DARG190
DILE191
DTCE302
DHOH419
DHOH421
DHOH426
DHOH435
DHOH452
DHOH575
DHOH576

site_idAD1
Number of Residues15
Detailsbinding site for residue TCE D 302
ChainResidue
DPRO92
DSER140
DSER141
DLEU150
DSER153
DARG157
DGLY184
DTHR194
DARG213
DNAP301
DHOH405
DHOH410
DHOH421
DHOH469
DHOH494

site_idAD2
Number of Residues7
Detailsbinding site for residue MPO D 303
ChainResidue
DPRO94
DGLY95
DASN99
DTHR101
DASP104
DARG107
DHOH433

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PDB entries from 2025-12-17

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