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5UPD

Methyltransferase domain of human Wolf-Hirschhorn Syndrome Candidate 1-Like protein 1 (WHSC1L1)

Replaces:  4YZ8
Functional Information from GO Data
ChainGOidnamespacecontents
A0005634cellular_componentnucleus
A0042054molecular_functionhistone methyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues19
Detailsbinding site for residue SAM A 1301
ChainResidue
AARG1155
ATYR1261
AGLU1272
ACYS1273
AHIS1274
ALEU1284
AHOH1433
AHOH1438
AHOH1444
AHOH1456
AHOH1483
ATRP1157
ATHR1197
AASN1198
APHE1199
ATYR1200
AARG1220
AASN1223
AHIS1224

site_idAC2
Number of Residues4
Detailsbinding site for residue ZN A 1319
ChainResidue
ACYS1098
ACYS1100
ACYS1108
ACYS1114

site_idAC3
Number of Residues4
Detailsbinding site for residue ZN A 1320
ChainResidue
ACYS1108
ACYS1123
ACYS1128
ACYS1134

site_idAC4
Number of Residues4
Detailsbinding site for residue ZN A 1321
ChainResidue
ACYS1226
ACYS1273
ACYS1275
ACYS1280

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues50
DetailsDomain: {"description":"AWS","evidences":[{"source":"PROSITE-ProRule","id":"PRU00562","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues117
DetailsDomain: {"description":"SET","evidences":[{"source":"PROSITE-ProRule","id":"PRU00190","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues16
DetailsDomain: {"description":"Post-SET","evidences":[{"source":"PROSITE-ProRule","id":"PRU00155","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"PubMed","id":"25218447","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

242199

PDB entries from 2025-09-24

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