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5UP0

Crystal structure of human PDE1B catalytic domain in complex with inhibitor 3 (6-(4-chlorobenzyl)-8,9,10,11-tetrahydrobenzo[4,5]thieno[3,2-e][1,2,4]triazolo[1,5-c]pyrimidin-5(6H)-one)

Functional Information from GO Data
ChainGOidnamespacecontents
A0004114molecular_function3',5'-cyclic-nucleotide phosphodiesterase activity
A0007165biological_processsignal transduction
A0008081molecular_functionphosphoric diester hydrolase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue ZN A 601
ChainResidue
AHIS227
AHIS263
AASP264
AASP370
AHOH703
AHOH775

site_idAC2
Number of Residues6
Detailsbinding site for residue MG A 602
ChainResidue
AHOH732
AHOH745
AHOH783
AASP264
AHOH703
AHOH716

site_idAC3
Number of Residues6
Detailsbinding site for residue 8HP A 603
ChainResidue
AHIS373
ALEU388
AMET389
ALEU409
AGLN421
APHE424

Functional Information from PROSITE/UniProt
site_idPS00126
Number of Residues12
DetailsPDEASE_I_1 3'5'-cyclic nucleotide phosphodiesterase domain signature. HDYeHtGttNsF
ChainResidueDetails
AHIS263-PHE274

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Proton donor => ECO:0000250|UniProtKB:O76083
ChainResidueDetails
AGLY243

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:15260978, ECO:0007744|PDB:1TAZ, ECO:0007744|PDB:4NPV, ECO:0007744|PDB:4NPW
ChainResidueDetails
ACYS247
AALA283
AILE284
AGLU390

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:Q01065
ChainResidueDetails
AVAL486

223532

PDB entries from 2024-08-07

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