Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5UGM

Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with Edaglitazone

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0004879molecular_functionnuclear receptor activity
A0005634cellular_componentnucleus
A0006355biological_processregulation of DNA-templated transcription
B0003677molecular_functionDNA binding
B0004879molecular_functionnuclear receptor activity
B0005634cellular_componentnucleus
B0006355biological_processregulation of DNA-templated transcription
Functional Information from PDB Data
site_idAC1
Number of Residues14
Detailsbinding site for residue 8A7 A 501
ChainResidue
APHE282
AHIS449
ALEU469
ATYR473
AKNA503
AHOH692
ACYS285
ASER289
AHIS323
ATYR327
ALEU330
AILE341
ASER342
AMET364

site_idAC2
Number of Residues14
Detailsbinding site for residue 8A7 A 502
ChainResidue
AILE267
APRO269
ALEU270
AGLN271
APHE287
ASER464
AHIS466
APRO467
AHOH744
BVAL293
BTHR297
BVAL315
BLEU468
BHOH647

site_idAC3
Number of Residues10
Detailsbinding site for residue KNA A 503
ChainResidue
APHE264
AHIS266
AARG280
AGLN283
APHE287
ASER342
A8A7501
AHOH665
AHOH668
AHOH693

site_idAC4
Number of Residues16
Detailsbinding site for residue 8A7 B 501
ChainResidue
BPHE264
BPHE282
BCYS285
BSER289
BHIS323
BTYR327
BLEU330
BILE341
BSER342
BMET364
BLYS367
BHIS449
BLEU469
BTYR473
BKNA503
BHOH730

site_idAC5
Number of Residues15
Detailsbinding site for residue 8A7 B 502
ChainResidue
AVAL293
ATHR297
AVAL315
ALEU468
AILE472
AHOH610
AHOH621
BPRO269
BLEU270
BGLN271
BPHE287
BSER464
BHIS466
BPRO467
BHOH758

site_idAC6
Number of Residues9
Detailsbinding site for residue KNA B 503
ChainResidue
BPHE264
BLYS265
BHIS266
BARG280
BGLN283
B8A7501
BHOH628
BHOH669
BHOH689

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
ChainResidueDetails
AGLN286
AHIS323
AHIS449
ATYR473
BGLN286
BHIS323
BHIS449
BTYR473

site_idSWS_FT_FI2
Number of Residues4
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:36737649
ChainResidueDetails
ALYS224
BLYS224

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon