5UD6
Crystal structure of DHDPS from Cyanidioschyzon merolae with lysine bound
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0008840 | molecular_function | 4-hydroxy-tetrahydrodipicolinate synthase activity |
A | 0009089 | biological_process | lysine biosynthetic process via diaminopimelate |
A | 0016829 | molecular_function | lyase activity |
B | 0008840 | molecular_function | 4-hydroxy-tetrahydrodipicolinate synthase activity |
B | 0009089 | biological_process | lysine biosynthetic process via diaminopimelate |
B | 0016829 | molecular_function | lyase activity |
C | 0008840 | molecular_function | 4-hydroxy-tetrahydrodipicolinate synthase activity |
C | 0009089 | biological_process | lysine biosynthetic process via diaminopimelate |
C | 0016829 | molecular_function | lyase activity |
D | 0008840 | molecular_function | 4-hydroxy-tetrahydrodipicolinate synthase activity |
D | 0009089 | biological_process | lysine biosynthetic process via diaminopimelate |
D | 0016829 | molecular_function | lyase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 6 |
Details | binding site for residue CA A 401 |
Chain | Residue |
A | ALA52 |
A | SER58 |
A | GLU66 |
A | GLY87 |
A | HOH544 |
A | HOH572 |
site_id | AC2 |
Number of Residues | 9 |
Details | binding site for residue LYS A 402 |
Chain | Residue |
A | GLU66 |
A | TYR117 |
A | HOH504 |
B | ASN91 |
B | GLU95 |
B | LYS402 |
A | SER58 |
A | ALA59 |
A | LEU61 |
site_id | AC3 |
Number of Residues | 6 |
Details | binding site for residue CA B 401 |
Chain | Residue |
B | ALA52 |
B | SER58 |
B | GLU66 |
B | GLY87 |
B | HOH558 |
B | HOH566 |
site_id | AC4 |
Number of Residues | 9 |
Details | binding site for residue LYS B 402 |
Chain | Residue |
A | ASN91 |
A | GLU95 |
A | LYS402 |
B | SER58 |
B | ALA59 |
B | LEU61 |
B | TRP63 |
B | GLU66 |
B | TYR117 |
site_id | AC5 |
Number of Residues | 4 |
Details | binding site for residue CA C 401 |
Chain | Residue |
C | ALA52 |
C | SER58 |
C | GLU66 |
C | GLY87 |
site_id | AC6 |
Number of Residues | 9 |
Details | binding site for residue LYS C 402 |
Chain | Residue |
C | SER58 |
C | ALA59 |
C | LEU61 |
C | TRP63 |
C | GLU66 |
C | TYR117 |
D | ASN91 |
D | GLU95 |
D | HOH502 |
site_id | AC7 |
Number of Residues | 5 |
Details | binding site for residue CA D 401 |
Chain | Residue |
D | ALA52 |
D | SER58 |
D | GLU66 |
D | GLY87 |
D | HOH547 |
site_id | AC8 |
Number of Residues | 9 |
Details | binding site for residue LYS D 402 |
Chain | Residue |
C | ASN91 |
C | GLU95 |
D | SER58 |
D | ALA59 |
D | LEU61 |
D | TRP63 |
D | GLU66 |
D | TYR117 |
D | HOH502 |
Functional Information from PROSITE/UniProt