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5U1C

Structure of tetrameric HIV-1 Strand Transfer Complex Intasome

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0003677molecular_functionDNA binding
A0004521molecular_functionRNA endonuclease activity
A0008270molecular_functionzinc ion binding
A0015074biological_processDNA integration
B0003676molecular_functionnucleic acid binding
B0003677molecular_functionDNA binding
B0004521molecular_functionRNA endonuclease activity
B0008270molecular_functionzinc ion binding
B0015074biological_processDNA integration
C0003676molecular_functionnucleic acid binding
C0003677molecular_functionDNA binding
C0004521molecular_functionRNA endonuclease activity
C0008270molecular_functionzinc ion binding
C0015074biological_processDNA integration
D0003676molecular_functionnucleic acid binding
D0003677molecular_functionDNA binding
D0004521molecular_functionRNA endonuclease activity
D0008270molecular_functionzinc ion binding
D0015074biological_processDNA integration
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 500
ChainResidue
AHIS12
AHIS16
ACYS40
ACYS43

site_idAC2
Number of Residues4
Detailsbinding site for residue MG A 501
ChainResidue
AASP64
AASP116
GDT11
JDG22

site_idAC3
Number of Residues4
Detailsbinding site for residue ZN C 500
ChainResidue
CHIS16
CCYS40
CCYS43
CHIS12

site_idAC4
Number of Residues4
Detailsbinding site for residue MG C 501
ChainResidue
CASP64
CASP116
FDG22
HDT11

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues164
DetailsZN_FING: Integrase-type => ECO:0000255|PROSITE-ProRule:PRU00450
ChainResidueDetails
AASP3-GLN44
BASP3-GLN44
CASP3-GLN44
DASP3-GLN44

site_idSWS_FT_FI2
Number of Residues188
DetailsDNA_BIND: Integrase-type => ECO:0000255|PROSITE-ProRule:PRU00506
ChainResidueDetails
APHE223-ASP270
BPHE223-ASP270
CPHE223-ASP270
DPHE223-ASP270

site_idSWS_FT_FI3
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
ALYS-11
BLYS-11
CLYS-11
DLYS-11

site_idSWS_FT_FI4
Number of Residues16
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00450
ChainResidueDetails
AHIS12
CHIS16
CCYS40
CCYS43
DHIS12
DHIS16
DCYS40
DCYS43
AHIS16
ACYS40
ACYS43
BHIS12
BHIS16
BCYS40
BCYS43
CHIS12

site_idSWS_FT_FI5
Number of Residues8
DetailsBINDING:
ChainResidueDetails
AASP64
AASP116
BASP64
BASP116
CASP64
CASP116
DASP64
DASP116

site_idSWS_FT_FI6
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P04585
ChainResidueDetails
AGLN152
BGLN152
CGLN152
DGLN152

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PDB entries from 2024-11-06

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