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5TWT

Characterization of class III peroxidase from switchgrass (Panicum virgatum)

Functional Information from GO Data
ChainGOidnamespacecontents
A0004601molecular_functionperoxidase activity
A0005576cellular_componentextracellular region
A0006979biological_processresponse to oxidative stress
A0016491molecular_functionoxidoreductase activity
A0020037molecular_functionheme binding
A0042744biological_processhydrogen peroxide catabolic process
A0046872molecular_functionmetal ion binding
A0098869biological_processcellular oxidant detoxification
A0140825molecular_functionlactoperoxidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues26
Detailsbinding site for residue HEM A 301
ChainResidue
AARG31
ALEU160
ALEU163
ASER164
AALA166
AHIS167
AGLY170
AGLN171
AALA172
AGLN173
AASN176
AALA34
ALEU210
ALEU233
ASER235
AHOH472
AHOH483
AHOH561
AHOH597
ASER35
AARG38
APHE41
ASER71
APRO137
APRO138
APHE150

site_idAC2
Number of Residues5
Detailsbinding site for residue CA A 302
ChainResidue
ATHR168
AASP211
ATHR214
ATHR217
AASP219

site_idAC3
Number of Residues6
Detailsbinding site for residue CA A 303
ChainResidue
AASP43
AVAL46
AGLY48
AASP50
ASER52
AHOH422

site_idAC4
Number of Residues7
Detailsbinding site for residue SO4 A 304
ChainResidue
AARG73
AGLY74
APHE75
AGLY76
AHOH402
AHOH414
AHOH427

site_idAC5
Number of Residues7
Detailsbinding site for residue SO4 A 305
ChainResidue
ATHR214
APRO215
AASN216
ATHR217
AHOH426
AHOH443
AHOH571

Functional Information from PROSITE/UniProt
site_idPS00435
Number of Residues11
DetailsPEROXIDASE_1 Peroxidases proximal heme-ligand signature. DLVALSGAHTI
ChainResidueDetails
AASP159-ILE169

site_idPS00436
Number of Residues12
DetailsPEROXIDASE_2 Peroxidases active site signature. GAslLRLhFHDC
ChainResidueDetails
AGLY33-CYS44

218853

PDB entries from 2024-04-24

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