Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5TUY

Structure of human G9a SET-domain (EHMT2) in complex with inhibitor MS0124

Functional Information from GO Data
ChainGOidnamespacecontents
A0002039molecular_functionp53 binding
A0005634cellular_componentnucleus
A0008270molecular_functionzinc ion binding
A0016279molecular_functionprotein-lysine N-methyltransferase activity
A0042054molecular_functionhistone methyltransferase activity
B0002039molecular_functionp53 binding
B0005634cellular_componentnucleus
B0008270molecular_functionzinc ion binding
B0016279molecular_functionprotein-lysine N-methyltransferase activity
B0042054molecular_functionhistone methyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue ZN A 1501
ChainResidue
ACYS980
ACYS1017
ACYS1023
ACYS1027
AZN1503

site_idAC2
Number of Residues4
Detailsbinding site for residue ZN A 1502
ChainResidue
ACYS974
ACYS987
ACYS1017
ACYS1021

site_idAC3
Number of Residues5
Detailsbinding site for residue ZN A 1503
ChainResidue
ACYS974
ACYS976
ACYS980
ACYS985
AZN1501

site_idAC4
Number of Residues4
Detailsbinding site for residue ZN A 1504
ChainResidue
ACYS1115
ACYS1168
ACYS1170
ACYS1175

site_idAC5
Number of Residues10
Detailsbinding site for residue SAM A 1505
ChainResidue
AMET1048
ATRP1050
ASER1084
ATYR1085
AARG1109
AASN1112
AHIS1113
ATYR1154
APHE1166
AGLN1169

site_idAC6
Number of Residues10
Detailsbinding site for residue 7L6 A 1506
ChainResidue
AASP1074
AALA1077
AASP1078
AARG1080
AASP1083
ALEU1086
AASP1088
ACYS1098
AARG1157
APHE1158

site_idAC7
Number of Residues4
Detailsbinding site for residue ZN B 1501
ChainResidue
BCYS980
BCYS1017
BCYS1023
BCYS1027

site_idAC8
Number of Residues4
Detailsbinding site for residue ZN B 1502
ChainResidue
BCYS974
BCYS987
BCYS1017
BCYS1021

site_idAC9
Number of Residues4
Detailsbinding site for residue ZN B 1503
ChainResidue
BCYS974
BCYS976
BCYS980
BCYS985

site_idAD1
Number of Residues4
Detailsbinding site for residue ZN B 1504
ChainResidue
BCYS1115
BCYS1168
BCYS1170
BCYS1175

site_idAD2
Number of Residues14
Detailsbinding site for residue SAM B 1505
ChainResidue
BMET1048
BGLY1049
BTRP1050
BSER1084
BTYR1085
BARG1109
BPHE1110
BASN1112
BHIS1113
BTYR1154
BPHE1166
BCYS1168
BGLN1169
BHOH1630

site_idAD3
Number of Residues10
Detailsbinding site for residue 7L6 B 1506
ChainResidue
BASP1074
BALA1077
BASP1078
BARG1080
BASP1083
BLEU1086
BASP1088
BCYS1098
BPHE1158
BILE1161

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues126
DetailsDomain: {"description":"Pre-SET","evidences":[{"source":"PROSITE-ProRule","id":"PRU00157","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues117
DetailsDomain: {"description":"SET","evidences":[{"source":"PROSITE-ProRule","id":"PRU00190","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues32
DetailsDomain: {"description":"Post-SET"}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues25
DetailsRegion: {"description":"Interaction with histone H3","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues36
DetailsBinding site: {}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues2
DetailsSite: {"description":"Histone H3K9me binding","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

247536

PDB entries from 2026-01-14

PDB statisticsPDBj update infoContact PDBjnumon