5TH5
Crystal Structure of QueE from Bacillus subtilis with 6-carboxypterin-5'-deoxyadenosyl ester bound
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000287 | molecular_function | magnesium ion binding |
A | 0003824 | molecular_function | catalytic activity |
A | 0008616 | biological_process | queuosine biosynthetic process |
A | 0016829 | molecular_function | lyase activity |
A | 0016840 | molecular_function | carbon-nitrogen lyase activity |
A | 0042803 | molecular_function | protein homodimerization activity |
A | 0046872 | molecular_function | metal ion binding |
A | 0051536 | molecular_function | iron-sulfur cluster binding |
A | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
A | 1904047 | molecular_function | S-adenosyl-L-methionine binding |
B | 0000287 | molecular_function | magnesium ion binding |
B | 0003824 | molecular_function | catalytic activity |
B | 0008616 | biological_process | queuosine biosynthetic process |
B | 0016829 | molecular_function | lyase activity |
B | 0016840 | molecular_function | carbon-nitrogen lyase activity |
B | 0042803 | molecular_function | protein homodimerization activity |
B | 0046872 | molecular_function | metal ion binding |
B | 0051536 | molecular_function | iron-sulfur cluster binding |
B | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
B | 1904047 | molecular_function | S-adenosyl-L-methionine binding |
C | 0000287 | molecular_function | magnesium ion binding |
C | 0003824 | molecular_function | catalytic activity |
C | 0008616 | biological_process | queuosine biosynthetic process |
C | 0016829 | molecular_function | lyase activity |
C | 0016840 | molecular_function | carbon-nitrogen lyase activity |
C | 0042803 | molecular_function | protein homodimerization activity |
C | 0046872 | molecular_function | metal ion binding |
C | 0051536 | molecular_function | iron-sulfur cluster binding |
C | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
C | 1904047 | molecular_function | S-adenosyl-L-methionine binding |
D | 0000287 | molecular_function | magnesium ion binding |
D | 0003824 | molecular_function | catalytic activity |
D | 0008616 | biological_process | queuosine biosynthetic process |
D | 0016829 | molecular_function | lyase activity |
D | 0016840 | molecular_function | carbon-nitrogen lyase activity |
D | 0042803 | molecular_function | protein homodimerization activity |
D | 0046872 | molecular_function | metal ion binding |
D | 0051536 | molecular_function | iron-sulfur cluster binding |
D | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
D | 1904047 | molecular_function | S-adenosyl-L-methionine binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 9 |
Details | binding site for residue SF4 A 301 |
Chain | Residue |
A | CYS34 |
A | CYS38 |
A | CYS41 |
A | TRP47 |
A | GLY83 |
A | GLN110 |
A | LYS129 |
A | 7C5302 |
A | MET303 |
site_id | AC2 |
Number of Residues | 25 |
Details | binding site for residue 7C5 A 302 |
Chain | Residue |
A | ILE15 |
A | GLN16 |
A | GLY17 |
A | GLU18 |
A | PHE28 |
A | ARG30 |
A | TRP40 |
A | ASP42 |
A | SER81 |
A | GLU108 |
A | SER127 |
A | LYS129 |
A | LYS161 |
A | VAL163 |
A | GLN188 |
A | VAL189 |
A | ASN191 |
A | VAL194 |
A | GLN231 |
A | HIS233 |
A | VAL243 |
A | SF4301 |
A | MET303 |
A | HOH407 |
A | HOH422 |
site_id | AC3 |
Number of Residues | 12 |
Details | binding site for residue MET A 303 |
Chain | Residue |
A | ASP42 |
A | SER81 |
A | GLY82 |
A | GLY83 |
A | GLU108 |
A | THR109 |
A | GLN110 |
A | SER127 |
A | LYS129 |
A | SF4301 |
A | 7C5302 |
A | HOH407 |
site_id | AC4 |
Number of Residues | 9 |
Details | binding site for residue SF4 B 301 |
Chain | Residue |
B | CYS34 |
B | CYS38 |
B | CYS41 |
B | TRP47 |
B | GLY83 |
B | GLN110 |
B | LYS129 |
B | 7C5302 |
B | MET303 |
site_id | AC5 |
Number of Residues | 25 |
Details | binding site for residue 7C5 B 302 |
Chain | Residue |
B | ILE15 |
B | GLN16 |
B | GLY17 |
B | GLU18 |
B | PHE28 |
B | ARG30 |
B | TRP40 |
B | ASP42 |
B | SER81 |
B | GLU108 |
B | SER127 |
B | LYS129 |
B | LYS161 |
B | VAL163 |
B | GLN188 |
B | VAL189 |
B | ASN191 |
B | VAL194 |
B | GLN231 |
B | HIS233 |
B | VAL243 |
B | SF4301 |
B | MET303 |
B | HOH401 |
B | HOH402 |
site_id | AC6 |
Number of Residues | 11 |
Details | binding site for residue MET B 303 |
Chain | Residue |
B | ASP42 |
B | SER81 |
B | GLY82 |
B | GLY83 |
B | GLU108 |
B | THR109 |
B | GLN110 |
B | SER127 |
B | LYS129 |
B | SF4301 |
B | 7C5302 |
site_id | AC7 |
Number of Residues | 9 |
Details | binding site for residue SF4 C 301 |
Chain | Residue |
C | MET303 |
C | CYS34 |
C | CYS38 |
C | CYS41 |
C | TRP47 |
C | GLY83 |
C | GLN110 |
C | LYS129 |
C | 7C5302 |
site_id | AC8 |
Number of Residues | 25 |
Details | binding site for residue 7C5 C 302 |
Chain | Residue |
C | ILE15 |
C | GLN16 |
C | GLY17 |
C | GLU18 |
C | PHE28 |
C | ARG30 |
C | TRP40 |
C | ASP42 |
C | SER81 |
C | GLU108 |
C | SER127 |
C | LYS129 |
C | LYS161 |
C | VAL163 |
C | GLN188 |
C | VAL189 |
C | ASN191 |
C | VAL194 |
C | GLN231 |
C | HIS233 |
C | VAL243 |
C | SF4301 |
C | MET303 |
C | HOH408 |
C | HOH446 |
site_id | AC9 |
Number of Residues | 12 |
Details | binding site for residue MET C 303 |
Chain | Residue |
C | ASP42 |
C | SER81 |
C | GLY82 |
C | GLY83 |
C | GLU108 |
C | THR109 |
C | GLN110 |
C | SER127 |
C | LYS129 |
C | SF4301 |
C | 7C5302 |
C | HOH408 |
site_id | AD1 |
Number of Residues | 9 |
Details | binding site for residue SF4 D 301 |
Chain | Residue |
D | CYS34 |
D | CYS38 |
D | CYS41 |
D | TRP47 |
D | GLY83 |
D | GLN110 |
D | LYS129 |
D | 7C5302 |
D | MET303 |
site_id | AD2 |
Number of Residues | 24 |
Details | binding site for residue 7C5 D 302 |
Chain | Residue |
D | ILE15 |
D | GLN16 |
D | GLY17 |
D | GLU18 |
D | PHE28 |
D | ARG30 |
D | TRP40 |
D | ASP42 |
D | SER81 |
D | GLU108 |
D | SER127 |
D | LYS129 |
D | LYS161 |
D | VAL163 |
D | GLN188 |
D | VAL189 |
D | ASN191 |
D | VAL194 |
D | GLN231 |
D | HIS233 |
D | VAL243 |
D | SF4301 |
D | MET303 |
D | HOH401 |
site_id | AD3 |
Number of Residues | 12 |
Details | binding site for residue MET D 303 |
Chain | Residue |
D | ASP42 |
D | SER81 |
D | GLY82 |
D | GLY83 |
D | GLU108 |
D | THR109 |
D | GLN110 |
D | SER127 |
D | LYS129 |
D | SF4301 |
D | 7C5302 |
D | HOH401 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 36 |
Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00917 |
Chain | Residue | Details |
A | ILE15 | |
B | ILE15 | |
B | ARG30 | |
B | CYS34 | |
B | CYS38 | |
B | CYS41 | |
B | SER43 | |
B | SER81 | |
B | GLY83 | |
B | SER127 | |
C | ILE15 | |
A | ARG30 | |
C | ARG30 | |
C | CYS34 | |
C | CYS38 | |
C | CYS41 | |
C | SER43 | |
C | SER81 | |
C | GLY83 | |
C | SER127 | |
D | ILE15 | |
D | ARG30 | |
A | CYS34 | |
D | CYS34 | |
D | CYS38 | |
D | CYS41 | |
D | SER43 | |
D | SER81 | |
D | GLY83 | |
D | SER127 | |
A | CYS38 | |
A | CYS41 | |
A | SER43 | |
A | SER81 | |
A | GLY83 | |
A | SER127 |