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5T6L

Crystal structure of 10E8 Fab in complex with the MPER epitope scaffold T117v2

Functional Information from PDB Data
site_idAC1
Number of Residues9
Detailsbinding site for residue GOL H 301
ChainResidue
HASN31
HTRP33
HGLY52
HPRO52
HGLY52
HGLU53
HLYS97
ISER78
IGLY118

site_idAC2
Number of Residues5
Detailsbinding site for residue GOL H 302
ChainResidue
HHOH405
LPRO55
LSER56
LGLY57
LVAL58

site_idAC3
Number of Residues3
Detailsbinding site for residue GOL H 303
ChainResidue
HTYR99
HHOH403
HHOH447

site_idAC4
Number of Residues9
Detailsbinding site for residue EPE L 301
ChainResidue
HGLN39
HLYS43
LLYS38
LGLU85
LTYR87
LGLY100
LGLY101
LTHR164
LHOH402

site_idAC5
Number of Residues7
Detailsbinding site for residue GOL L 302
ChainResidue
LLEU28
LARG29
LSER30
LHIS31
LTYR32
LALA66
LHOH451

site_idAC6
Number of Residues3
Detailsbinding site for residue GOL L 303
ChainResidue
IASN125
LGLY95
LARG95

site_idAC7
Number of Residues12
Detailsbinding site for residue GOL A 301
ChainResidue
AASN31
ATRP33
AGLY52
APRO52
AGLY52
AGLU53
ALYS97
AGOL307
AHOH461
GSER78
GGLY118
GTRP120

site_idAC8
Number of Residues4
Detailsbinding site for residue GOL A 302
ChainResidue
AARG19
ASER70
AGLU81
HARG105

site_idAC9
Number of Residues2
Detailsbinding site for residue GOL A 303
ChainResidue
ATYR99
AHOH471

site_idAD1
Number of Residues8
Detailsbinding site for residue GOL A 304
ChainResidue
AVAL5
AGLU6
ASER7
ASER21
ASER23
APHE77
HSER17
HASN82

site_idAD2
Number of Residues5
Detailsbinding site for residue GOL A 305
ChainResidue
AGLY42
ALYS43
BGLU85
BTYR87
BGLY100

site_idAD3
Number of Residues5
Detailsbinding site for residue GOL A 306
ChainResidue
ASER7
AGLY8
AARG19
ASER21
AHOH411

site_idAD4
Number of Residues6
Detailsbinding site for residue GOL A 307
ChainResidue
ALYS97
AGOL301
GASP77
GSER78
GTRP120
GILE123

site_idAD5
Number of Residues2
Detailsbinding site for residue GOL B 301
ChainResidue
BALA66
BSER67

site_idAD6
Number of Residues7
Detailsbinding site for residue GOL B 302
ChainResidue
BLEU28
BARG29
BSER30
BHIS31
BALA66
BSER67
BHOH447

site_idAD7
Number of Residues2
Detailsbinding site for residue GOL B 303
ChainResidue
BARG95
GASN125

site_idAD8
Number of Residues6
Detailsbinding site for residue GOL G 201
ChainResidue
BARG190
BSER191
GARG20
GHIS21
GASP148
GHOH317

site_idAD9
Number of Residues9
Detailsbinding site for residue GOL G 202
ChainResidue
GASN84
GGLY118
GASN119
GHOH304
GHOH309
AGLY52
GVAL81
GARG82
GGLN83

Functional Information from PROSITE/UniProt
site_idPS00290
Number of Residues7
DetailsIG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YSCQVTH
ChainResidueDetails
LTYR192-HIS198
HTYR194-HIS200

225946

PDB entries from 2024-10-09

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