5T62
Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3-Tif6-Lsg1 Complex
This is a non-PDB format compatible entry.
Functional Information from GO Data
Chain | GOid | namespace | contents |
D | 0002181 | biological_process | cytoplasmic translation |
D | 0003723 | molecular_function | RNA binding |
D | 0003735 | molecular_function | structural constituent of ribosome |
D | 0005737 | cellular_component | cytoplasm |
D | 0005829 | cellular_component | cytosol |
D | 0005840 | cellular_component | ribosome |
D | 0006412 | biological_process | translation |
D | 0019843 | molecular_function | rRNA binding |
D | 0022625 | cellular_component | cytosolic large ribosomal subunit |
D | 0022626 | cellular_component | cytosolic ribosome |
D | 1990904 | cellular_component | ribonucleoprotein complex |
E | 0000027 | biological_process | ribosomal large subunit assembly |
E | 0002181 | biological_process | cytoplasmic translation |
E | 0003723 | molecular_function | RNA binding |
E | 0003735 | molecular_function | structural constituent of ribosome |
E | 0005515 | molecular_function | protein binding |
E | 0005737 | cellular_component | cytoplasm |
E | 0005829 | cellular_component | cytosol |
E | 0005840 | cellular_component | ribosome |
E | 0006364 | biological_process | rRNA processing |
E | 0006412 | biological_process | translation |
E | 0022625 | cellular_component | cytosolic large ribosomal subunit |
E | 1990145 | biological_process | maintenance of translational fidelity |
E | 1990904 | cellular_component | ribonucleoprotein complex |
F | 0002181 | biological_process | cytoplasmic translation |
F | 0003723 | molecular_function | RNA binding |
F | 0003735 | molecular_function | structural constituent of ribosome |
F | 0005634 | cellular_component | nucleus |
F | 0005737 | cellular_component | cytoplasm |
F | 0005829 | cellular_component | cytosol |
F | 0005840 | cellular_component | ribosome |
F | 0006412 | biological_process | translation |
F | 0022625 | cellular_component | cytosolic large ribosomal subunit |
F | 1990904 | cellular_component | ribonucleoprotein complex |
G | 0000027 | biological_process | ribosomal large subunit assembly |
G | 0002181 | biological_process | cytoplasmic translation |
G | 0003723 | molecular_function | RNA binding |
G | 0003735 | molecular_function | structural constituent of ribosome |
G | 0005515 | molecular_function | protein binding |
G | 0005634 | cellular_component | nucleus |
G | 0005737 | cellular_component | cytoplasm |
G | 0005829 | cellular_component | cytosol |
G | 0005840 | cellular_component | ribosome |
G | 0006412 | biological_process | translation |
G | 0008097 | molecular_function | 5S rRNA binding |
G | 0019843 | molecular_function | rRNA binding |
G | 0022625 | cellular_component | cytosolic large ribosomal subunit |
G | 1990904 | cellular_component | ribonucleoprotein complex |
H | 0000027 | biological_process | ribosomal large subunit assembly |
H | 0002181 | biological_process | cytoplasmic translation |
H | 0003723 | molecular_function | RNA binding |
H | 0003735 | molecular_function | structural constituent of ribosome |
H | 0005737 | cellular_component | cytoplasm |
H | 0005829 | cellular_component | cytosol |
H | 0005840 | cellular_component | ribosome |
H | 0006412 | biological_process | translation |
H | 0022625 | cellular_component | cytosolic large ribosomal subunit |
H | 1990904 | cellular_component | ribonucleoprotein complex |
I | 0000463 | biological_process | maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
I | 0000470 | biological_process | maturation of LSU-rRNA |
I | 0002181 | biological_process | cytoplasmic translation |
I | 0003723 | molecular_function | RNA binding |
I | 0003735 | molecular_function | structural constituent of ribosome |
I | 0005737 | cellular_component | cytoplasm |
I | 0005829 | cellular_component | cytosol |
I | 0005840 | cellular_component | ribosome |
I | 0022625 | cellular_component | cytosolic large ribosomal subunit |
I | 0042273 | biological_process | ribosomal large subunit biogenesis |
I | 1990904 | cellular_component | ribonucleoprotein complex |
J | 0000470 | biological_process | maturation of LSU-rRNA |
J | 0002181 | biological_process | cytoplasmic translation |
J | 0003723 | molecular_function | RNA binding |
J | 0003735 | molecular_function | structural constituent of ribosome |
J | 0005737 | cellular_component | cytoplasm |
J | 0005829 | cellular_component | cytosol |
J | 0005840 | cellular_component | ribosome |
J | 0022625 | cellular_component | cytosolic large ribosomal subunit |
J | 0042254 | biological_process | ribosome biogenesis |
J | 0043232 | cellular_component | intracellular non-membrane-bounded organelle |
J | 1990904 | cellular_component | ribonucleoprotein complex |
K | 0002181 | biological_process | cytoplasmic translation |
K | 0003735 | molecular_function | structural constituent of ribosome |
K | 0005737 | cellular_component | cytoplasm |
K | 0005829 | cellular_component | cytosol |
K | 0005840 | cellular_component | ribosome |
K | 0006412 | biological_process | translation |
K | 0019843 | molecular_function | rRNA binding |
K | 0022625 | cellular_component | cytosolic large ribosomal subunit |
K | 1990904 | cellular_component | ribonucleoprotein complex |
L | 0000027 | biological_process | ribosomal large subunit assembly |
L | 0002181 | biological_process | cytoplasmic translation |
L | 0003735 | molecular_function | structural constituent of ribosome |
L | 0005737 | cellular_component | cytoplasm |
L | 0005829 | cellular_component | cytosol |
L | 0005840 | cellular_component | ribosome |
L | 0006412 | biological_process | translation |
L | 0006415 | biological_process | translational termination |
L | 0022625 | cellular_component | cytosolic large ribosomal subunit |
L | 1990904 | cellular_component | ribonucleoprotein complex |
M | 0000027 | biological_process | ribosomal large subunit assembly |
M | 0002181 | biological_process | cytoplasmic translation |
M | 0003723 | molecular_function | RNA binding |
M | 0003735 | molecular_function | structural constituent of ribosome |
M | 0005634 | cellular_component | nucleus |
M | 0005737 | cellular_component | cytoplasm |
M | 0005829 | cellular_component | cytosol |
M | 0005840 | cellular_component | ribosome |
M | 0006412 | biological_process | translation |
M | 0019843 | molecular_function | rRNA binding |
M | 0022625 | cellular_component | cytosolic large ribosomal subunit |
M | 1990904 | cellular_component | ribonucleoprotein complex |
N | 0002181 | biological_process | cytoplasmic translation |
N | 0003723 | molecular_function | RNA binding |
N | 0003735 | molecular_function | structural constituent of ribosome |
N | 0005737 | cellular_component | cytoplasm |
N | 0005829 | cellular_component | cytosol |
N | 0005840 | cellular_component | ribosome |
N | 0006412 | biological_process | translation |
N | 0022625 | cellular_component | cytosolic large ribosomal subunit |
N | 1990904 | cellular_component | ribonucleoprotein complex |
O | 0002181 | biological_process | cytoplasmic translation |
O | 0003723 | molecular_function | RNA binding |
O | 0003735 | molecular_function | structural constituent of ribosome |
O | 0005737 | cellular_component | cytoplasm |
O | 0005829 | cellular_component | cytosol |
O | 0005840 | cellular_component | ribosome |
O | 0006412 | biological_process | translation |
O | 0016236 | biological_process | macroautophagy |
O | 0022625 | cellular_component | cytosolic large ribosomal subunit |
O | 0032991 | cellular_component | protein-containing complex |
O | 0042273 | biological_process | ribosomal large subunit biogenesis |
O | 0043229 | cellular_component | intracellular organelle |
O | 1990904 | cellular_component | ribonucleoprotein complex |
Q | 0002181 | biological_process | cytoplasmic translation |
Q | 0003735 | molecular_function | structural constituent of ribosome |
Q | 0005737 | cellular_component | cytoplasm |
Q | 0005829 | cellular_component | cytosol |
Q | 0005840 | cellular_component | ribosome |
Q | 0006412 | biological_process | translation |
Q | 0008270 | molecular_function | zinc ion binding |
Q | 0022625 | cellular_component | cytosolic large ribosomal subunit |
Q | 0044391 | cellular_component | ribosomal subunit |
Q | 0046677 | biological_process | response to antibiotic |
Q | 0046898 | biological_process | response to cycloheximide |
Q | 1990904 | cellular_component | ribonucleoprotein complex |
R | 0002181 | biological_process | cytoplasmic translation |
R | 0003735 | molecular_function | structural constituent of ribosome |
R | 0005737 | cellular_component | cytoplasm |
R | 0005829 | cellular_component | cytosol |
R | 0005840 | cellular_component | ribosome |
R | 0006412 | biological_process | translation |
R | 0022625 | cellular_component | cytosolic large ribosomal subunit |
R | 0044391 | cellular_component | ribosomal subunit |
R | 0046872 | molecular_function | metal ion binding |
R | 0070180 | molecular_function | large ribosomal subunit rRNA binding |
R | 1990904 | cellular_component | ribonucleoprotein complex |
V | 0000055 | biological_process | ribosomal large subunit export from nucleus |
V | 0005634 | cellular_component | nucleus |
V | 0005654 | cellular_component | nucleoplasm |
V | 0005737 | cellular_component | cytoplasm |
V | 0005829 | cellular_component | cytosol |
V | 0015031 | biological_process | protein transport |
V | 0043023 | molecular_function | ribosomal large subunit binding |
V | 0070180 | molecular_function | large ribosomal subunit rRNA binding |
W | 0000027 | biological_process | ribosomal large subunit assembly |
W | 0000054 | biological_process | ribosomal subunit export from nucleus |
W | 0000166 | molecular_function | nucleotide binding |
W | 0003729 | molecular_function | mRNA binding |
W | 0003924 | molecular_function | GTPase activity |
W | 0005515 | molecular_function | protein binding |
W | 0005525 | molecular_function | GTP binding |
W | 0005737 | cellular_component | cytoplasm |
W | 0005829 | cellular_component | cytosol |
W | 0015031 | biological_process | protein transport |
W | 0016787 | molecular_function | hydrolase activity |
W | 0022625 | cellular_component | cytosolic large ribosomal subunit |
W | 0043332 | cellular_component | mating projection tip |
X | 0000054 | biological_process | ribosomal subunit export from nucleus |
X | 0000460 | biological_process | maturation of 5.8S rRNA |
X | 0000463 | biological_process | maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
X | 0000466 | biological_process | maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
X | 0000470 | biological_process | maturation of LSU-rRNA |
X | 0003743 | molecular_function | translation initiation factor activity |
X | 0005515 | molecular_function | protein binding |
X | 0005634 | cellular_component | nucleus |
X | 0005730 | cellular_component | nucleolus |
X | 0005737 | cellular_component | cytoplasm |
X | 0005829 | cellular_component | cytosol |
X | 0006364 | biological_process | rRNA processing |
X | 0006412 | biological_process | translation |
X | 0006413 | biological_process | translational initiation |
X | 0030687 | cellular_component | preribosome, large subunit precursor |
X | 0042254 | biological_process | ribosome biogenesis |
X | 0042256 | biological_process | cytosolic ribosome assembly |
X | 0042273 | biological_process | ribosomal large subunit biogenesis |
X | 0043022 | molecular_function | ribosome binding |
X | 0043023 | molecular_function | ribosomal large subunit binding |
X | 1902626 | biological_process | assembly of large subunit precursor of preribosome |
a | 0002181 | biological_process | cytoplasmic translation |
a | 0003723 | molecular_function | RNA binding |
a | 0003735 | molecular_function | structural constituent of ribosome |
a | 0005737 | cellular_component | cytoplasm |
a | 0005829 | cellular_component | cytosol |
a | 0005840 | cellular_component | ribosome |
a | 0006412 | biological_process | translation |
a | 0022625 | cellular_component | cytosolic large ribosomal subunit |
a | 0022626 | cellular_component | cytosolic ribosome |
a | 1990904 | cellular_component | ribonucleoprotein complex |
b | 0002181 | biological_process | cytoplasmic translation |
b | 0003723 | molecular_function | RNA binding |
b | 0003729 | molecular_function | mRNA binding |
b | 0003735 | molecular_function | structural constituent of ribosome |
b | 0005737 | cellular_component | cytoplasm |
b | 0005829 | cellular_component | cytosol |
b | 0005840 | cellular_component | ribosome |
b | 0006412 | biological_process | translation |
b | 0015934 | cellular_component | large ribosomal subunit |
b | 0017148 | biological_process | negative regulation of translation |
b | 0022625 | cellular_component | cytosolic large ribosomal subunit |
b | 1990904 | cellular_component | ribonucleoprotein complex |
c | 0000448 | biological_process | cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
c | 0002181 | biological_process | cytoplasmic translation |
c | 0003735 | molecular_function | structural constituent of ribosome |
c | 0005737 | cellular_component | cytoplasm |
c | 0005829 | cellular_component | cytosol |
c | 0005840 | cellular_component | ribosome |
c | 0006412 | biological_process | translation |
c | 0015934 | cellular_component | large ribosomal subunit |
c | 0022625 | cellular_component | cytosolic large ribosomal subunit |
c | 0030687 | cellular_component | preribosome, large subunit precursor |
c | 1990904 | cellular_component | ribonucleoprotein complex |
d | 0002181 | biological_process | cytoplasmic translation |
d | 0003723 | molecular_function | RNA binding |
d | 0003735 | molecular_function | structural constituent of ribosome |
d | 0005737 | cellular_component | cytoplasm |
d | 0005829 | cellular_component | cytosol |
d | 0005840 | cellular_component | ribosome |
d | 0006412 | biological_process | translation |
d | 0022625 | cellular_component | cytosolic large ribosomal subunit |
d | 0043232 | cellular_component | intracellular non-membrane-bounded organelle |
d | 1990904 | cellular_component | ribonucleoprotein complex |
e | 0002181 | biological_process | cytoplasmic translation |
e | 0003723 | molecular_function | RNA binding |
e | 0003735 | molecular_function | structural constituent of ribosome |
e | 0005737 | cellular_component | cytoplasm |
e | 0005829 | cellular_component | cytosol |
e | 0005840 | cellular_component | ribosome |
e | 0006412 | biological_process | translation |
e | 0022625 | cellular_component | cytosolic large ribosomal subunit |
e | 1990904 | cellular_component | ribonucleoprotein complex |
f | 0002181 | biological_process | cytoplasmic translation |
f | 0003735 | molecular_function | structural constituent of ribosome |
f | 0005737 | cellular_component | cytoplasm |
f | 0005829 | cellular_component | cytosol |
f | 0005840 | cellular_component | ribosome |
f | 0006412 | biological_process | translation |
f | 0022625 | cellular_component | cytosolic large ribosomal subunit |
f | 1990904 | cellular_component | ribonucleoprotein complex |
g | 0002181 | biological_process | cytoplasmic translation |
g | 0003735 | molecular_function | structural constituent of ribosome |
g | 0005737 | cellular_component | cytoplasm |
g | 0005829 | cellular_component | cytosol |
g | 0005840 | cellular_component | ribosome |
g | 0006412 | biological_process | translation |
g | 0022625 | cellular_component | cytosolic large ribosomal subunit |
g | 1990904 | cellular_component | ribonucleoprotein complex |
h | 0002181 | biological_process | cytoplasmic translation |
h | 0003723 | molecular_function | RNA binding |
h | 0003735 | molecular_function | structural constituent of ribosome |
h | 0005737 | cellular_component | cytoplasm |
h | 0005829 | cellular_component | cytosol |
h | 0005840 | cellular_component | ribosome |
h | 0006412 | biological_process | translation |
h | 0022625 | cellular_component | cytosolic large ribosomal subunit |
h | 1990904 | cellular_component | ribonucleoprotein complex |
i | 0002181 | biological_process | cytoplasmic translation |
i | 0003735 | molecular_function | structural constituent of ribosome |
i | 0005737 | cellular_component | cytoplasm |
i | 0005829 | cellular_component | cytosol |
i | 0005840 | cellular_component | ribosome |
i | 0006412 | biological_process | translation |
i | 0022625 | cellular_component | cytosolic large ribosomal subunit |
i | 0070180 | molecular_function | large ribosomal subunit rRNA binding |
i | 1990904 | cellular_component | ribonucleoprotein complex |
j | 0002181 | biological_process | cytoplasmic translation |
j | 0003723 | molecular_function | RNA binding |
j | 0003729 | molecular_function | mRNA binding |
j | 0003735 | molecular_function | structural constituent of ribosome |
j | 0005737 | cellular_component | cytoplasm |
j | 0005829 | cellular_component | cytosol |
j | 0005840 | cellular_component | ribosome |
j | 0022625 | cellular_component | cytosolic large ribosomal subunit |
j | 1990904 | cellular_component | ribonucleoprotein complex |
k | 0000027 | biological_process | ribosomal large subunit assembly |
k | 0002181 | biological_process | cytoplasmic translation |
k | 0003723 | molecular_function | RNA binding |
k | 0003735 | molecular_function | structural constituent of ribosome |
k | 0005515 | molecular_function | protein binding |
k | 0005737 | cellular_component | cytoplasm |
k | 0005829 | cellular_component | cytosol |
k | 0005840 | cellular_component | ribosome |
k | 0006412 | biological_process | translation |
k | 0019843 | molecular_function | rRNA binding |
k | 0022625 | cellular_component | cytosolic large ribosomal subunit |
k | 0030687 | cellular_component | preribosome, large subunit precursor |
k | 1990904 | cellular_component | ribonucleoprotein complex |
l | 0002181 | biological_process | cytoplasmic translation |
l | 0003723 | molecular_function | RNA binding |
l | 0003735 | molecular_function | structural constituent of ribosome |
l | 0005737 | cellular_component | cytoplasm |
l | 0005829 | cellular_component | cytosol |
l | 0005840 | cellular_component | ribosome |
l | 0006412 | biological_process | translation |
l | 0015934 | cellular_component | large ribosomal subunit |
l | 0022625 | cellular_component | cytosolic large ribosomal subunit |
l | 0042273 | biological_process | ribosomal large subunit biogenesis |
l | 1990904 | cellular_component | ribonucleoprotein complex |
m | 0002181 | biological_process | cytoplasmic translation |
m | 0003735 | molecular_function | structural constituent of ribosome |
m | 0005737 | cellular_component | cytoplasm |
m | 0005829 | cellular_component | cytosol |
m | 0005840 | cellular_component | ribosome |
m | 0006412 | biological_process | translation |
m | 0022625 | cellular_component | cytosolic large ribosomal subunit |
m | 1990904 | cellular_component | ribonucleoprotein complex |
n | 0002181 | biological_process | cytoplasmic translation |
n | 0003723 | molecular_function | RNA binding |
n | 0003735 | molecular_function | structural constituent of ribosome |
n | 0005634 | cellular_component | nucleus |
n | 0005737 | cellular_component | cytoplasm |
n | 0005829 | cellular_component | cytosol |
n | 0005840 | cellular_component | ribosome |
n | 0006412 | biological_process | translation |
n | 0015934 | cellular_component | large ribosomal subunit |
n | 0022625 | cellular_component | cytosolic large ribosomal subunit |
n | 0043232 | cellular_component | intracellular non-membrane-bounded organelle |
n | 1990904 | cellular_component | ribonucleoprotein complex |
o | 0002181 | biological_process | cytoplasmic translation |
o | 0003735 | molecular_function | structural constituent of ribosome |
o | 0005737 | cellular_component | cytoplasm |
o | 0005829 | cellular_component | cytosol |
o | 0005840 | cellular_component | ribosome |
o | 0006412 | biological_process | translation |
o | 0022625 | cellular_component | cytosolic large ribosomal subunit |
o | 1990904 | cellular_component | ribonucleoprotein complex |
p | 0002181 | biological_process | cytoplasmic translation |
p | 0003723 | molecular_function | RNA binding |
p | 0003735 | molecular_function | structural constituent of ribosome |
p | 0005737 | cellular_component | cytoplasm |
p | 0005829 | cellular_component | cytosol |
p | 0005840 | cellular_component | ribosome |
p | 0006364 | biological_process | rRNA processing |
p | 0022625 | cellular_component | cytosolic large ribosomal subunit |
p | 0030627 | molecular_function | pre-mRNA 5'-splice site binding |
p | 0048025 | biological_process | negative regulation of mRNA splicing, via spliceosome |
p | 1990904 | cellular_component | ribonucleoprotein complex |
q | 0002181 | biological_process | cytoplasmic translation |
q | 0003735 | molecular_function | structural constituent of ribosome |
q | 0005737 | cellular_component | cytoplasm |
q | 0005829 | cellular_component | cytosol |
q | 0005840 | cellular_component | ribosome |
q | 0006412 | biological_process | translation |
q | 0006450 | biological_process | regulation of translational fidelity |
q | 0022625 | cellular_component | cytosolic large ribosomal subunit |
q | 1990904 | cellular_component | ribonucleoprotein complex |
r | 0002181 | biological_process | cytoplasmic translation |
r | 0003735 | molecular_function | structural constituent of ribosome |
r | 0005737 | cellular_component | cytoplasm |
r | 0005829 | cellular_component | cytosol |
r | 0005840 | cellular_component | ribosome |
r | 0006412 | biological_process | translation |
r | 0022625 | cellular_component | cytosolic large ribosomal subunit |
r | 1990904 | cellular_component | ribonucleoprotein complex |
s | 0002181 | biological_process | cytoplasmic translation |
s | 0003735 | molecular_function | structural constituent of ribosome |
s | 0005737 | cellular_component | cytoplasm |
s | 0005829 | cellular_component | cytosol |
s | 0005840 | cellular_component | ribosome |
s | 0006412 | biological_process | translation |
s | 0022625 | cellular_component | cytosolic large ribosomal subunit |
s | 0042273 | biological_process | ribosomal large subunit biogenesis |
s | 1990904 | cellular_component | ribonucleoprotein complex |
t | 0002181 | biological_process | cytoplasmic translation |
t | 0003735 | molecular_function | structural constituent of ribosome |
t | 0005737 | cellular_component | cytoplasm |
t | 0005829 | cellular_component | cytosol |
t | 0005840 | cellular_component | ribosome |
t | 0006412 | biological_process | translation |
t | 0022625 | cellular_component | cytosolic large ribosomal subunit |
t | 0030687 | cellular_component | preribosome, large subunit precursor |
t | 0042254 | biological_process | ribosome biogenesis |
t | 1990904 | cellular_component | ribonucleoprotein complex |
u | 0000463 | biological_process | maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
u | 0002181 | biological_process | cytoplasmic translation |
u | 0003729 | molecular_function | mRNA binding |
u | 0003735 | molecular_function | structural constituent of ribosome |
u | 0005737 | cellular_component | cytoplasm |
u | 0005829 | cellular_component | cytosol |
u | 0005840 | cellular_component | ribosome |
u | 0006412 | biological_process | translation |
u | 0022625 | cellular_component | cytosolic large ribosomal subunit |
u | 0030687 | cellular_component | preribosome, large subunit precursor |
u | 1990904 | cellular_component | ribonucleoprotein complex |
v | 0002181 | biological_process | cytoplasmic translation |
v | 0003723 | molecular_function | RNA binding |
v | 0003735 | molecular_function | structural constituent of ribosome |
v | 0005737 | cellular_component | cytoplasm |
v | 0005829 | cellular_component | cytosol |
v | 0005840 | cellular_component | ribosome |
v | 0006412 | biological_process | translation |
v | 0022625 | cellular_component | cytosolic large ribosomal subunit |
v | 1990904 | cellular_component | ribonucleoprotein complex |
w | 0000448 | biological_process | cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
w | 0002181 | biological_process | cytoplasmic translation |
w | 0003723 | molecular_function | RNA binding |
w | 0003735 | molecular_function | structural constituent of ribosome |
w | 0005737 | cellular_component | cytoplasm |
w | 0005829 | cellular_component | cytosol |
w | 0005840 | cellular_component | ribosome |
w | 0006412 | biological_process | translation |
w | 0008270 | molecular_function | zinc ion binding |
w | 0019843 | molecular_function | rRNA binding |
w | 0022625 | cellular_component | cytosolic large ribosomal subunit |
w | 0030687 | cellular_component | preribosome, large subunit precursor |
w | 0044391 | cellular_component | ribosomal subunit |
w | 0046872 | molecular_function | metal ion binding |
w | 1990904 | cellular_component | ribonucleoprotein complex |
x | 0002181 | biological_process | cytoplasmic translation |
x | 0003735 | molecular_function | structural constituent of ribosome |
x | 0005737 | cellular_component | cytoplasm |
x | 0005829 | cellular_component | cytosol |
x | 0005840 | cellular_component | ribosome |
x | 0006412 | biological_process | translation |
x | 0022618 | biological_process | protein-RNA complex assembly |
x | 0022625 | cellular_component | cytosolic large ribosomal subunit |
x | 1990904 | cellular_component | ribonucleoprotein complex |
y | 0002181 | biological_process | cytoplasmic translation |
y | 0003735 | molecular_function | structural constituent of ribosome |
y | 0005515 | molecular_function | protein binding |
y | 0005737 | cellular_component | cytoplasm |
y | 0005829 | cellular_component | cytosol |
y | 0005840 | cellular_component | ribosome |
y | 0006412 | biological_process | translation |
y | 0022625 | cellular_component | cytosolic large ribosomal subunit |
y | 1990904 | cellular_component | ribonucleoprotein complex |
z | 0000027 | biological_process | ribosomal large subunit assembly |
z | 0000055 | biological_process | ribosomal large subunit export from nucleus |
z | 0002181 | biological_process | cytoplasmic translation |
z | 0003735 | molecular_function | structural constituent of ribosome |
z | 0005634 | cellular_component | nucleus |
z | 0005737 | cellular_component | cytoplasm |
z | 0005829 | cellular_component | cytosol |
z | 0005840 | cellular_component | ribosome |
z | 0006412 | biological_process | translation |
z | 0008270 | molecular_function | zinc ion binding |
z | 0016567 | biological_process | protein ubiquitination |
z | 0019941 | biological_process | modification-dependent protein catabolic process |
z | 0022625 | cellular_component | cytosolic large ribosomal subunit |
z | 0031386 | molecular_function | protein tag activity |
z | 0031625 | molecular_function | ubiquitin protein ligase binding |
z | 0042254 | biological_process | ribosome biogenesis |
z | 1990904 | cellular_component | ribonucleoprotein complex |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 3 |
Details | binding site for residue MG A 3402 |
Chain | Residue |
A | A39 |
A | G41 |
A | C42 |
site_id | AC2 |
Number of Residues | 3 |
Details | binding site for residue MG A 3403 |
Chain | Residue |
A | G41 |
A | C42 |
A | G2412 |
site_id | AC3 |
Number of Residues | 2 |
Details | binding site for residue MG A 3404 |
Chain | Residue |
A | A49 |
A | U97 |
site_id | AC4 |
Number of Residues | 1 |
Details | binding site for residue MG A 3405 |
Chain | Residue |
A | A52 |
site_id | AC5 |
Number of Residues | 1 |
Details | binding site for residue MG A 3406 |
Chain | Residue |
A | A62 |
site_id | AC6 |
Number of Residues | 1 |
Details | binding site for residue MG A 3407 |
Chain | Residue |
A | A63 |
site_id | AC7 |
Number of Residues | 2 |
Details | binding site for residue MG A 3408 |
Chain | Residue |
A | A77 |
A | U78 |
site_id | AC8 |
Number of Residues | 3 |
Details | binding site for residue MG A 3409 |
Chain | Residue |
A | A324 |
A | A325 |
A | U326 |
site_id | AC9 |
Number of Residues | 1 |
Details | binding site for residue MG A 3410 |
Chain | Residue |
A | C340 |
site_id | AD1 |
Number of Residues | 2 |
Details | binding site for residue MG A 3411 |
Chain | Residue |
A | G345 |
A | A348 |
site_id | AD2 |
Number of Residues | 1 |
Details | binding site for residue MG A 3412 |
Chain | Residue |
A | G658 |
site_id | AD3 |
Number of Residues | 1 |
Details | binding site for residue MG A 3413 |
Chain | Residue |
A | C804 |
site_id | AD4 |
Number of Residues | 3 |
Details | binding site for residue MG A 3414 |
Chain | Residue |
A | C861 |
A | U862 |
A | C893 |
site_id | AD5 |
Number of Residues | 2 |
Details | binding site for residue MG A 3415 |
Chain | Residue |
A | C863 |
A | C893 |
site_id | AD6 |
Number of Residues | 3 |
Details | binding site for residue MG A 3416 |
Chain | Residue |
A | G875 |
A | U2949 |
E | LYS241 |
site_id | AD7 |
Number of Residues | 1 |
Details | binding site for residue MG A 3417 |
Chain | Residue |
A | G875 |
site_id | AD8 |
Number of Residues | 2 |
Details | binding site for residue MG A 3418 |
Chain | Residue |
A | A883 |
A | C1846 |
site_id | AD9 |
Number of Residues | 3 |
Details | binding site for residue MG A 3419 |
Chain | Residue |
A | A915 |
A | G916 |
A | A2958 |
site_id | AE1 |
Number of Residues | 2 |
Details | binding site for residue MG A 3420 |
Chain | Residue |
A | G916 |
A | G2957 |
site_id | AE2 |
Number of Residues | 2 |
Details | binding site for residue MG A 3421 |
Chain | Residue |
A | U919 |
A | U922 |
site_id | AE3 |
Number of Residues | 1 |
Details | binding site for residue MG A 3422 |
Chain | Residue |
A | U939 |
site_id | AE4 |
Number of Residues | 2 |
Details | binding site for residue MG A 3423 |
Chain | Residue |
A | U942 |
A | G1434 |
site_id | AE5 |
Number of Residues | 3 |
Details | binding site for residue MG A 3424 |
Chain | Residue |
A | C948 |
A | A1366 |
A | G1367 |
site_id | AE6 |
Number of Residues | 2 |
Details | binding site for residue MG A 3425 |
Chain | Residue |
A | G950 |
A | G1367 |
site_id | AE7 |
Number of Residues | 1 |
Details | binding site for residue MG A 3426 |
Chain | Residue |
A | C961 |
site_id | AE8 |
Number of Residues | 2 |
Details | binding site for residue MG A 3427 |
Chain | Residue |
A | G963 |
A | G1115 |
site_id | AE9 |
Number of Residues | 1 |
Details | binding site for residue MG A 3428 |
Chain | Residue |
A | U995 |
site_id | AF1 |
Number of Residues | 2 |
Details | binding site for residue MG A 3430 |
Chain | Residue |
A | G1116 |
A | G1117 |
site_id | AF2 |
Number of Residues | 1 |
Details | binding site for residue MG A 3431 |
Chain | Residue |
A | A1133 |
site_id | AF3 |
Number of Residues | 1 |
Details | binding site for residue MG A 3432 |
Chain | Residue |
A | C1141 |
site_id | AF4 |
Number of Residues | 2 |
Details | binding site for residue MG A 3433 |
Chain | Residue |
A | A645 |
A | A1143 |
site_id | AF5 |
Number of Residues | 2 |
Details | binding site for residue MG A 3435 |
Chain | Residue |
A | A1150 |
A | U1151 |
site_id | AF6 |
Number of Residues | 3 |
Details | binding site for residue MG A 3436 |
Chain | Residue |
A | A1169 |
A | A1170 |
I | PRO217 |
site_id | AF7 |
Number of Residues | 1 |
Details | binding site for residue MG A 3437 |
Chain | Residue |
A | G1300 |
site_id | AF8 |
Number of Residues | 1 |
Details | binding site for residue MG A 3439 |
Chain | Residue |
A | A1369 |
site_id | AF9 |
Number of Residues | 1 |
Details | binding site for residue MG A 3440 |
Chain | Residue |
A | A1393 |
site_id | AG1 |
Number of Residues | 3 |
Details | binding site for residue MG A 3441 |
Chain | Residue |
A | A396 |
A | A399 |
A | G1417 |
site_id | AG2 |
Number of Residues | 2 |
Details | binding site for residue MG A 3442 |
Chain | Residue |
A | A1433 |
A | G1434 |
site_id | AG3 |
Number of Residues | 2 |
Details | binding site for residue MG A 3443 |
Chain | Residue |
A | A1449 |
A | U2349 |
site_id | AG4 |
Number of Residues | 2 |
Details | binding site for residue MG A 3444 |
Chain | Residue |
A | A1449 |
A | G1450 |
site_id | AG5 |
Number of Residues | 2 |
Details | binding site for residue MG A 3445 |
Chain | Residue |
A | C1478 |
A | U1871 |
site_id | AG6 |
Number of Residues | 2 |
Details | binding site for residue MG A 3446 |
Chain | Residue |
A | G1488 |
A | U1837 |
site_id | AG7 |
Number of Residues | 3 |
Details | binding site for residue MG A 3447 |
Chain | Residue |
A | G1507 |
A | C1508 |
A | A1509 |
site_id | AG8 |
Number of Residues | 2 |
Details | binding site for residue MG A 3448 |
Chain | Residue |
A | C1532 |
A | G1586 |
site_id | AG9 |
Number of Residues | 2 |
Details | binding site for residue MG A 3449 |
Chain | Residue |
A | G1590 |
A | G1592 |
site_id | AH1 |
Number of Residues | 4 |
Details | binding site for residue MG A 3450 |
Chain | Residue |
A | G1488 |
A | A1605 |
A | A1835 |
A | C1836 |
site_id | AH2 |
Number of Residues | 4 |
Details | binding site for residue MG A 3451 |
Chain | Residue |
A | A1901 |
A | G1902 |
A | U1903 |
A | A2919 |
site_id | AH3 |
Number of Residues | 2 |
Details | binding site for residue MG A 3452 |
Chain | Residue |
A | G1902 |
A | U1903 |
site_id | AH4 |
Number of Residues | 3 |
Details | binding site for residue MG A 3453 |
Chain | Residue |
A | A2138 |
A | U2140 |
A | U2141 |
site_id | AH5 |
Number of Residues | 1 |
Details | binding site for residue MG A 3454 |
Chain | Residue |
A | C2146 |
site_id | AH6 |
Number of Residues | 1 |
Details | binding site for residue MG A 3456 |
Chain | Residue |
A | A2279 |
site_id | AH7 |
Number of Residues | 2 |
Details | binding site for residue MG A 3457 |
Chain | Residue |
A | A2312 |
A | A2313 |
site_id | AH8 |
Number of Residues | 2 |
Details | binding site for residue MG A 3458 |
Chain | Residue |
A | C2329 |
A | U2920 |
site_id | AH9 |
Number of Residues | 1 |
Details | binding site for residue MG A 3459 |
Chain | Residue |
A | G652 |
site_id | AI1 |
Number of Residues | 1 |
Details | binding site for residue MG A 3460 |
Chain | Residue |
A | A2367 |
site_id | AI2 |
Number of Residues | 2 |
Details | binding site for residue MG A 3461 |
Chain | Residue |
A | G635 |
A | U2379 |
site_id | AI3 |
Number of Residues | 1 |
Details | binding site for residue MG A 3462 |
Chain | Residue |
A | G2874 |
site_id | AI4 |
Number of Residues | 2 |
Details | binding site for residue MG A 3463 |
Chain | Residue |
A | C2616 |
A | U2617 |
site_id | AI5 |
Number of Residues | 2 |
Details | binding site for residue MG A 3464 |
Chain | Residue |
A | A2413 |
A | U2612 |
site_id | AI6 |
Number of Residues | 2 |
Details | binding site for residue MG A 3465 |
Chain | Residue |
A | U2416 |
A | G2607 |
site_id | AI7 |
Number of Residues | 1 |
Details | binding site for residue MG A 3466 |
Chain | Residue |
A | G2639 |
site_id | AI8 |
Number of Residues | 2 |
Details | binding site for residue MG A 3467 |
Chain | Residue |
A | G2658 |
A | C2755 |
site_id | AI9 |
Number of Residues | 3 |
Details | binding site for residue MG A 3468 |
Chain | Residue |
A | G644 |
A | A2817 |
A | U2868 |
site_id | AJ1 |
Number of Residues | 4 |
Details | binding site for residue MG A 3469 |
Chain | Residue |
A | A2817 |
A | U2866 |
A | C2867 |
A | U2868 |
site_id | AJ2 |
Number of Residues | 3 |
Details | binding site for residue MG A 3470 |
Chain | Residue |
A | A2402 |
A | G2403 |
A | G2871 |
site_id | AJ3 |
Number of Residues | 2 |
Details | binding site for residue MG A 3471 |
Chain | Residue |
A | A2398 |
A | G2874 |
site_id | AJ4 |
Number of Residues | 1 |
Details | binding site for residue MG A 3472 |
Chain | Residue |
A | A2887 |
site_id | AJ5 |
Number of Residues | 3 |
Details | binding site for residue MG A 3473 |
Chain | Residue |
A | C2942 |
A | G2943 |
A | U2944 |
site_id | AJ6 |
Number of Residues | 5 |
Details | binding site for residue MG A 3474 |
Chain | Residue |
A | G2394 |
A | G2395 |
A | U2944 |
A | G2945 |
A | A2946 |
site_id | AJ7 |
Number of Residues | 1 |
Details | binding site for residue MG A 3475 |
Chain | Residue |
A | A2956 |
site_id | AJ8 |
Number of Residues | 2 |
Details | binding site for residue MG A 3476 |
Chain | Residue |
A | G1178 |
A | A1179 |
site_id | AJ9 |
Number of Residues | 2 |
Details | binding site for residue MG A 3477 |
Chain | Residue |
A | G2874 |
A | G2945 |
site_id | AK1 |
Number of Residues | 1 |
Details | binding site for residue MG A 3478 |
Chain | Residue |
A | U2611 |
site_id | AK2 |
Number of Residues | 2 |
Details | binding site for residue MG A 3479 |
Chain | Residue |
A | U1436 |
A | C1437 |
site_id | AK3 |
Number of Residues | 1 |
Details | binding site for residue MG A 3480 |
Chain | Residue |
A | A997 |
site_id | AK4 |
Number of Residues | 4 |
Details | binding site for residue MG A 3481 |
Chain | Residue |
A | C2616 |
A | C2622 |
A | G2623 |
A | G2624 |
site_id | AK5 |
Number of Residues | 2 |
Details | binding site for residue MG A 3482 |
Chain | Residue |
A | A2188 |
A | U2189 |
site_id | AK6 |
Number of Residues | 1 |
Details | binding site for residue MG A 3483 |
Chain | Residue |
A | C2959 |
site_id | AK7 |
Number of Residues | 5 |
Details | binding site for residue MG A 3484 |
Chain | Residue |
A | C2197 |
A | U2200 |
A | G2201 |
A | U2241 |
A | MG3486 |
site_id | AK8 |
Number of Residues | 3 |
Details | binding site for residue MG A 3485 |
Chain | Residue |
A | C2197 |
A | A2198 |
A | G2199 |
site_id | AK9 |
Number of Residues | 3 |
Details | binding site for residue MG A 3486 |
Chain | Residue |
A | G2240 |
A | U2241 |
A | MG3484 |
site_id | AL1 |
Number of Residues | 1 |
Details | binding site for residue MG A 3487 |
Chain | Residue |
A | G2239 |
site_id | AL2 |
Number of Residues | 4 |
Details | binding site for residue MG A 3488 |
Chain | Residue |
A | G2606 |
A | G2607 |
A | G2608 |
A | MG3489 |
site_id | AL3 |
Number of Residues | 3 |
Details | binding site for residue MG A 3489 |
Chain | Residue |
A | U2423 |
A | G2606 |
A | MG3488 |
site_id | AL4 |
Number of Residues | 4 |
Details | binding site for residue MG A 3490 |
Chain | Residue |
A | A2147 |
A | U2148 |
A | G2187 |
D | LYS198 |
site_id | AL5 |
Number of Residues | 1 |
Details | binding site for residue MG A 3491 |
Chain | Residue |
A | G878 |
site_id | AL6 |
Number of Residues | 1 |
Details | binding site for residue MG A 3492 |
Chain | Residue |
A | G277 |
site_id | AL7 |
Number of Residues | 2 |
Details | binding site for residue MG A 3493 |
Chain | Residue |
A | G2754 |
A | C2756 |
site_id | AL8 |
Number of Residues | 2 |
Details | binding site for residue MG A 3494 |
Chain | Residue |
A | G2311 |
A | G2961 |
site_id | AL9 |
Number of Residues | 4 |
Details | binding site for residue MG A 3495 |
Chain | Residue |
A | G2311 |
A | A2312 |
A | U2314 |
A | MG3496 |
site_id | AM1 |
Number of Residues | 3 |
Details | binding site for residue MG A 3496 |
Chain | Residue |
A | G2311 |
A | U2962 |
A | MG3495 |
site_id | AM2 |
Number of Residues | 3 |
Details | binding site for residue MG A 3497 |
Chain | Residue |
A | G347 |
A | A348 |
A | A366 |
site_id | AM3 |
Number of Residues | 1 |
Details | binding site for residue MG A 3498 |
Chain | Residue |
A | U2274 |
site_id | AM4 |
Number of Residues | 2 |
Details | binding site for residue MG A 3499 |
Chain | Residue |
A | G2951 |
A | G2952 |
site_id | AM5 |
Number of Residues | 4 |
Details | binding site for residue MG A 3500 |
Chain | Residue |
A | G635 |
A | C636 |
A | C2378 |
A | U2379 |
site_id | AM6 |
Number of Residues | 2 |
Details | binding site for residue MG A 3501 |
Chain | Residue |
A | A806 |
A | G934 |
site_id | AM7 |
Number of Residues | 2 |
Details | binding site for residue MG A 3502 |
Chain | Residue |
A | G267 |
A | A317 |
site_id | AM8 |
Number of Residues | 1 |
Details | binding site for residue MG A 3503 |
Chain | Residue |
A | A2762 |
site_id | AM9 |
Number of Residues | 1 |
Details | binding site for residue MG A 3504 |
Chain | Residue |
A | A917 |
site_id | AN1 |
Number of Residues | 3 |
Details | binding site for residue MG A 3505 |
Chain | Residue |
A | U1398 |
A | A1399 |
C | A9 |
site_id | AN2 |
Number of Residues | 1 |
Details | binding site for residue MG A 3506 |
Chain | Residue |
A | U280 |
site_id | AN3 |
Number of Residues | 3 |
Details | binding site for residue MG A 3507 |
Chain | Residue |
A | C90 |
A | G281 |
A | G282 |
site_id | AN4 |
Number of Residues | 3 |
Details | binding site for residue MG A 3508 |
Chain | Residue |
A | U280 |
A | G282 |
A | G283 |
site_id | AN5 |
Number of Residues | 4 |
Details | binding site for residue MG A 3509 |
Chain | Residue |
A | C958 |
A | C959 |
A | G2800 |
A | A2801 |
site_id | AN6 |
Number of Residues | 1 |
Details | binding site for residue MG A 3510 |
Chain | Residue |
A | A3141 |
site_id | AN7 |
Number of Residues | 1 |
Details | binding site for residue MG A 3512 |
Chain | Residue |
A | G964 |
site_id | AN8 |
Number of Residues | 3 |
Details | binding site for residue MG A 3513 |
Chain | Residue |
A | G404 |
A | U405 |
A | G406 |
site_id | AN9 |
Number of Residues | 1 |
Details | binding site for residue MG A 3514 |
Chain | Residue |
A | C2389 |
site_id | AO1 |
Number of Residues | 2 |
Details | binding site for residue MG A 3515 |
Chain | Residue |
A | A1896 |
A | G1897 |
site_id | AO2 |
Number of Residues | 2 |
Details | binding site for residue MG A 3516 |
Chain | Residue |
A | A660 |
A | U1430 |
site_id | AO3 |
Number of Residues | 5 |
Details | binding site for residue MG A 3517 |
Chain | Residue |
A | C663 |
A | U664 |
A | U797 |
A | G798 |
A | G799 |
site_id | AO4 |
Number of Residues | 2 |
Details | binding site for residue MG A 3518 |
Chain | Residue |
A | U1173 |
A | G1174 |
site_id | AO5 |
Number of Residues | 1 |
Details | binding site for residue MG A 3519 |
Chain | Residue |
A | A2125 |
site_id | AO6 |
Number of Residues | 3 |
Details | binding site for residue MG A 3520 |
Chain | Residue |
A | C1496 |
A | C1497 |
A | G1514 |
site_id | AO7 |
Number of Residues | 1 |
Details | binding site for residue MG A 3522 |
Chain | Residue |
A | A2643 |
site_id | AO8 |
Number of Residues | 2 |
Details | binding site for residue MG A 3523 |
Chain | Residue |
A | A3087 |
E | LYS364 |
site_id | AO9 |
Number of Residues | 3 |
Details | binding site for residue MG A 3524 |
Chain | Residue |
A | G2370 |
A | G2371 |
A | G2375 |
site_id | AP1 |
Number of Residues | 1 |
Details | binding site for residue MG A 3525 |
Chain | Residue |
A | A2808 |
site_id | AP2 |
Number of Residues | 2 |
Details | binding site for residue MG A 3526 |
Chain | Residue |
A | C2359 |
A | G2400 |
site_id | AP3 |
Number of Residues | 4 |
Details | binding site for residue MG A 3527 |
Chain | Residue |
A | G2185 |
A | A2243 |
A | A2244 |
A | U2314 |
site_id | AP4 |
Number of Residues | 1 |
Details | binding site for residue MG A 3528 |
Chain | Residue |
A | A1933 |
site_id | AP5 |
Number of Residues | 2 |
Details | binding site for residue MG A 3529 |
Chain | Residue |
A | G86 |
A | C702 |
site_id | AP6 |
Number of Residues | 1 |
Details | binding site for residue MG A 3531 |
Chain | Residue |
A | G2376 |
site_id | AP7 |
Number of Residues | 2 |
Details | binding site for residue MG A 3532 |
Chain | Residue |
A | C650 |
A | A2872 |
site_id | AP8 |
Number of Residues | 1 |
Details | binding site for residue MG A 3533 |
Chain | Residue |
A | G2662 |
site_id | AP9 |
Number of Residues | 1 |
Details | binding site for residue MG A 3534 |
Chain | Residue |
A | G2794 |
site_id | AQ1 |
Number of Residues | 3 |
Details | binding site for residue MG A 3535 |
Chain | Residue |
A | A2348 |
A | U2349 |
A | G2391 |
site_id | AQ2 |
Number of Residues | 2 |
Details | binding site for residue MG A 3536 |
Chain | Residue |
A | G345 |
F | GLY97 |
site_id | AQ3 |
Number of Residues | 1 |
Details | binding site for residue MG A 3537 |
Chain | Residue |
A | C2132 |
site_id | AQ4 |
Number of Residues | 1 |
Details | binding site for residue MG A 3538 |
Chain | Residue |
A | C1844 |
site_id | AQ5 |
Number of Residues | 3 |
Details | binding site for residue MG A 3539 |
Chain | Residue |
A | G304 |
A | G2777 |
A | G2778 |
site_id | AQ6 |
Number of Residues | 1 |
Details | binding site for residue MG A 3540 |
Chain | Residue |
A | G2871 |
site_id | AQ7 |
Number of Residues | 2 |
Details | binding site for residue MG A 3541 |
Chain | Residue |
A | A65 |
A | A66 |
site_id | AQ8 |
Number of Residues | 1 |
Details | binding site for residue MG A 3542 |
Chain | Residue |
A | A1908 |
site_id | AQ9 |
Number of Residues | 4 |
Details | binding site for residue MG A 3543 |
Chain | Residue |
A | G1897 |
A | G1898 |
A | G2335 |
A | C2337 |
site_id | AR1 |
Number of Residues | 5 |
Details | binding site for residue MG A 3544 |
Chain | Residue |
A | G2414 |
A | C2415 |
A | U2613 |
A | G2805 |
A | U2806 |
site_id | AR2 |
Number of Residues | 3 |
Details | binding site for residue MG A 3545 |
Chain | Residue |
A | G1604 |
A | A1605 |
A | C1836 |
site_id | AR3 |
Number of Residues | 4 |
Details | binding site for residue MG A 3546 |
Chain | Residue |
A | U640 |
A | A645 |
A | A646 |
r | ASP39 |
site_id | AR4 |
Number of Residues | 3 |
Details | binding site for residue MG A 3547 |
Chain | Residue |
A | U871 |
A | U2141 |
A | A2142 |
site_id | AR5 |
Number of Residues | 4 |
Details | binding site for residue MG A 3548 |
Chain | Residue |
A | G274 |
A | U275 |
A | A289 |
A | G290 |
site_id | AR6 |
Number of Residues | 2 |
Details | binding site for residue K A 3549 |
Chain | Residue |
A | A409 |
A | U410 |
site_id | AR7 |
Number of Residues | 3 |
Details | binding site for residue K A 3550 |
Chain | Residue |
A | A816 |
A | A817 |
A | U819 |
site_id | AR8 |
Number of Residues | 2 |
Details | binding site for residue MG B 201 |
Chain | Residue |
A | C1156 |
B | G85 |
site_id | AR9 |
Number of Residues | 1 |
Details | binding site for residue MG B 202 |
Chain | Residue |
B | A45 |
site_id | AS1 |
Number of Residues | 1 |
Details | binding site for residue MG B 203 |
Chain | Residue |
B | A42 |
site_id | AS2 |
Number of Residues | 2 |
Details | binding site for residue MG B 204 |
Chain | Residue |
B | A55 |
B | A56 |
site_id | AS3 |
Number of Residues | 2 |
Details | binding site for residue MG B 205 |
Chain | Residue |
B | G65 |
B | A66 |
site_id | AS4 |
Number of Residues | 1 |
Details | binding site for residue MG C 201 |
Chain | Residue |
C | C35 |
site_id | AS5 |
Number of Residues | 2 |
Details | binding site for residue MG C 202 |
Chain | Residue |
C | C19 |
C | U20 |
site_id | AS6 |
Number of Residues | 2 |
Details | binding site for residue MG D 301 |
Chain | Residue |
D | ARG6 |
D | THR199 |
site_id | AS7 |
Number of Residues | 5 |
Details | binding site for residue MG a 301 |
Chain | Residue |
A | A34 |
A | A810 |
A | U811 |
a | THR80 |
a | TYR81 |
site_id | AS8 |
Number of Residues | 1 |
Details | binding site for residue MG c 201 |
Chain | Residue |
c | TYR130 |
site_id | AS9 |
Number of Residues | 1 |
Details | binding site for residue MG i 201 |
Chain | Residue |
i | ASN47 |
site_id | AT1 |
Number of Residues | 14 |
Details | binding site for residue GNP W 701 |
Chain | Residue |
W | LYS237 |
W | ALA265 |
W | LEU266 |
W | ASN346 |
W | VAL347 |
W | GLY348 |
W | LYS349 |
W | SER350 |
W | SER351 |
W | SER365 |
W | SER366 |
W | LYS370 |
W | THR371 |
W | MG702 |
site_id | AT2 |
Number of Residues | 4 |
Details | binding site for residue MG W 702 |
Chain | Residue |
W | SER350 |
W | SER363 |
W | THR371 |
W | GNP701 |
Functional Information from PROSITE/UniProt
site_id | PS00051 |
Number of Residues | 17 |
Details | RIBOSOMAL_L39E Ribosomal protein L39e signature. RTnntIryNakrRNWRR |
Chain | Residue | Details |
y | ARG30-ARG46 |
site_id | PS00474 |
Number of Residues | 24 |
Details | RIBOSOMAL_L3 Ribosomal protein L3 signature. FeqnemiDaiAvTkGHGfeGvthR |
Chain | Residue | Details |
E | PHE209-ARG232 |
site_id | PS00050 |
Number of Residues | 16 |
Details | RIBOSOMAL_L23 Ribosomal protein L23 signature. KKAYVRLTadydaldI |
Chain | Residue | Details |
k | LYS120-ILE135 |
site_id | PS00299 |
Number of Residues | 26 |
Details | UBIQUITIN_1 Ubiquitin domain signature. KskIqDkegIPpdqQrLIFaGkqleD |
Chain | Residue | Details |
z | LYS27-ASP52 |
site_id | PS01106 |
Number of Residues | 18 |
Details | RIBOSOMAL_L18E Ribosomal protein L18e signature. KaLflSKinRPpVSVsRI |
Chain | Residue | Details |
d | LYS50-ILE67 |
site_id | PS01194 |
Number of Residues | 24 |
Details | RIBOSOMAL_L15E Ribosomal protein L15e signature. DKARrLGYkAkqGFVIYRvRVrRG |
Chain | Residue | Details |
a | ASP46-GLY69 |
site_id | PS00700 |
Number of Residues | 22 |
Details | RIBOSOMAL_L6_2 Ribosomal protein L6 signature 2. QicrVrnKdiRkFlDGIYVshK |
Chain | Residue | Details |
K | GLN163-LYS184 |
site_id | PS01104 |
Number of Residues | 15 |
Details | RIBOSOMAL_L13E Ribosomal protein L13e signature. RaGRGFTLaEVkaaG |
Chain | Residue | Details |
N | ARG70-GLY84 |
site_id | PS01082 |
Number of Residues | 18 |
Details | RIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CkkmgVPYaiVkGKarLG |
Chain | Residue | Details |
J | CYS170-GLY187 |
site_id | PS00526 |
Number of Residues | 20 |
Details | RIBOSOMAL_L19E Ribosomal protein L19e signature. QKRLaAsvvgVGkrkVWLDP |
Chain | Residue | Details |
e | GLN7-PRO26 |
site_id | PS00634 |
Number of Residues | 33 |
Details | RIBOSOMAL_L30 Ribosomal protein L30 signature. VLqlLrLtRinSgTfvkvtkatleLLklIepYV |
Chain | Residue | Details |
I | VAL102-VAL134 |
site_id | PS00049 |
Number of Residues | 27 |
Details | RIBOSOMAL_L14 Ribosomal protein L14 signature. AIVVrqakswrrr.DGvflyFedNagVI |
Chain | Residue | Details |
i | ALA76-ILE102 |
site_id | PS01145 |
Number of Residues | 14 |
Details | RIBOSOMAL_L34E Ribosomal protein L34e signature. TrSnKikvvKTPGG |
Chain | Residue | Details |
t | THR15-GLY28 |
site_id | PS00783 |
Number of Residues | 24 |
Details | RIBOSOMAL_L13 Ribosomal protein L13 signature. LRGMVShktarGKaalerLkVFeG |
Chain | Residue | Details |
b | LEU84-GLY107 |
site_id | PS01077 |
Number of Residues | 20 |
Details | RIBOSOMAL_L37E Ribosomal protein L37e signature. GTpSfGkRhnks.HtlCnRCG |
Chain | Residue | Details |
w | GLY4-GLY23 |
site_id | PS01190 |
Number of Residues | 11 |
Details | RIBOSOMAL_L36E Ribosomal protein L36e signature. PYERRlIDLIR |
Chain | Residue | Details |
v | PRO52-ARG62 |
site_id | PS01257 |
Number of Residues | 22 |
Details | RIBOSOMAL_L10E Ribosomal protein L10e signature. ADRlqqGMRgAWGKPhGlaARV |
Chain | Residue | Details |
L | ALA108-VAL129 |
site_id | PS00464 |
Number of Residues | 25 |
Details | RIBOSOMAL_L22 Ribosomal protein L22 signature. RrrTyRAhGRinkyesspSHIELvV |
Chain | Residue | Details |
c | ARG126-VAL150 |
site_id | PS00709 |
Number of Residues | 25 |
Details | RIBOSOMAL_L30E_1 Ribosomal protein L30e signature 1. SgkytlGyKstVKslRqGksKlIII |
Chain | Residue | Details |
p | SER20-ILE44 |
site_id | PS00993 |
Number of Residues | 21 |
Details | RIBOSOMAL_L30E_2 Ribosomal protein L30e signature 2. ELGTavGKlfrvgvVsIlEaG |
Chain | Residue | Details |
p | GLU76-GLY96 |
site_id | PS00579 |
Number of Residues | 15 |
Details | RIBOSOMAL_L29 Ribosomal protein L29 signature. SLPKIKtVRKSIACV |
Chain | Residue | Details |
u | SER40-VAL54 |
site_id | PS00475 |
Number of Residues | 32 |
Details | RIBOSOMAL_L15 Ribosomal protein L15 signature. KILGkGrIpnvp.ViVkarfVSklAeekIraaG |
Chain | Residue | Details |
n | LYS111-GLY142 |
site_id | PS01073 |
Number of Residues | 18 |
Details | RIBOSOMAL_L24E Ribosomal protein L24e signature. FsGakIyPGrGtlFvRgD |
Chain | Residue | Details |
j | PHE8-ASP25 |
site_id | PS00580 |
Number of Residues | 21 |
Details | RIBOSOMAL_L32E Ribosomal protein L32e signature. FkRhhsdRyhRVaen..WRKqkG |
Chain | Residue | Details |
r | PHE17-GLY37 |
site_id | PS01107 |
Number of Residues | 12 |
Details | RIBOSOMAL_L27E Ribosomal protein L27e signature. GKNqWFFskLRF |
Chain | Residue | Details |
m | GLY125-PHE136 |
site_id | PS01170 |
Number of Residues | 19 |
Details | RIBOSOMAL_L6E Ribosomal protein L6e signature. NgvPLRRvnarYVIATSt.K |
Chain | Residue | Details |
H | ASN72-LYS90 |
site_id | PS00467 |
Number of Residues | 12 |
Details | RIBOSOMAL_L2 Ribosomal protein L2 signature. PktRGVAmNPvD |
Chain | Residue | Details |
D | PRO197-ASP208 |
site_id | PS01172 |
Number of Residues | 12 |
Details | RIBOSOMAL_L44E Ribosomal protein L44e signature. KtTKKvvLRleC |
Chain | Residue | Details |
Q | LYS63-CYS74 |
site_id | PS01105 |
Number of Residues | 22 |
Details | RIBOSOMAL_L35AE Ribosomal protein L35Ae signature. GKVtRtHGnsGvVrAtFrnnLP |
Chain | Residue | Details |
s | GLY69-PRO90 |
site_id | PS01108 |
Number of Residues | 18 |
Details | RIBOSOMAL_L24 Ribosomal protein L24 signature. DDeVlVVrGskKGqe.GkI |
Chain | Residue | Details |
l | ASP53-ILE70 |
site_id | PS01144 |
Number of Residues | 15 |
Details | RIBOSOMAL_L31E Ribosomal protein L31e signature. VRLApeLNqAiWkRG |
Chain | Residue | Details |
q | VAL49-GLY63 |
site_id | PS00358 |
Number of Residues | 17 |
Details | RIBOSOMAL_L5 Ribosomal protein L5 signature. LeqLSGQtpVqSkARyT |
Chain | Residue | Details |
M | LEU37-THR53 |
site_id | PS01171 |
Number of Residues | 26 |
Details | RIBOSOMAL_L21E Ribosomal protein L21e signature. GDiVdikangsiqk.GmpHkfYqGkTG |
Chain | Residue | Details |
g | GLY37-GLY62 |
site_id | PS00939 |
Number of Residues | 27 |
Details | RIBOSOMAL_L1E Ribosomal protein L1e signature. NhneKryATaSAIaATAvaslvlaRGH |
Chain | Residue | Details |
F | ASN114-HIS140 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | BINDING: BINDING => ECO:0000255 |
Chain | Residue | Details |
p | LYS53 | |
W | ASN236 | |
W | ASP387 | |
p | LYS83 |
site_id | SWS_FT_FI2 |
Number of Residues | 1 |
Details | BINDING: BINDING => ECO:0000305 |
Chain | Residue | Details |
e | LYS186 | |
W | GLY343 | |
z | LYS93 | |
w | CYS34 | |
w | CYS37 | |
e | LYS146 |
site_id | SWS_FT_FI3 |
Number of Residues | 1 |
Details | MOD_RES: Phosphoserine => ECO:0007744|PubMed:19779198 |
Chain | Residue | Details |
L | LYS101 | |
D | LYS119 | |
D | LYS145 | |
W | SER99 |
site_id | SWS_FT_FI4 |
Number of Residues | 1 |
Details | MOD_RES: Phosphoserine => ECO:0007744|PubMed:19779198 |
Chain | Residue | Details |
E | SER297 |
site_id | SWS_FT_FI5 |
Number of Residues | 3 |
Details | CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0007744|PubMed:22106047 |
Chain | Residue | Details |
E | LYS39 | |
E | LYS136 |