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5T62

Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3-Tif6-Lsg1 Complex

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
D0002181biological_processcytoplasmic translation
D0003723molecular_functionRNA binding
D0003735molecular_functionstructural constituent of ribosome
D0005737cellular_componentcytoplasm
D0005829cellular_componentcytosol
D0005840cellular_componentribosome
D0006412biological_processtranslation
D0019843molecular_functionrRNA binding
D0022625cellular_componentcytosolic large ribosomal subunit
D0022626cellular_componentcytosolic ribosome
D1990904cellular_componentribonucleoprotein complex
E0000027biological_processribosomal large subunit assembly
E0002181biological_processcytoplasmic translation
E0003723molecular_functionRNA binding
E0003735molecular_functionstructural constituent of ribosome
E0005515molecular_functionprotein binding
E0005737cellular_componentcytoplasm
E0005829cellular_componentcytosol
E0005840cellular_componentribosome
E0006364biological_processrRNA processing
E0006412biological_processtranslation
E0022625cellular_componentcytosolic large ribosomal subunit
E1990145biological_processmaintenance of translational fidelity
E1990904cellular_componentribonucleoprotein complex
F0002181biological_processcytoplasmic translation
F0003723molecular_functionRNA binding
F0003735molecular_functionstructural constituent of ribosome
F0005634cellular_componentnucleus
F0005737cellular_componentcytoplasm
F0005829cellular_componentcytosol
F0005840cellular_componentribosome
F0006412biological_processtranslation
F0022625cellular_componentcytosolic large ribosomal subunit
F1990904cellular_componentribonucleoprotein complex
G0000027biological_processribosomal large subunit assembly
G0002181biological_processcytoplasmic translation
G0003723molecular_functionRNA binding
G0003735molecular_functionstructural constituent of ribosome
G0005515molecular_functionprotein binding
G0005634cellular_componentnucleus
G0005737cellular_componentcytoplasm
G0005829cellular_componentcytosol
G0005840cellular_componentribosome
G0006412biological_processtranslation
G0008097molecular_function5S rRNA binding
G0019843molecular_functionrRNA binding
G0022625cellular_componentcytosolic large ribosomal subunit
G1990904cellular_componentribonucleoprotein complex
H0000027biological_processribosomal large subunit assembly
H0002181biological_processcytoplasmic translation
H0003723molecular_functionRNA binding
H0003735molecular_functionstructural constituent of ribosome
H0005737cellular_componentcytoplasm
H0005829cellular_componentcytosol
H0005840cellular_componentribosome
H0006412biological_processtranslation
H0022625cellular_componentcytosolic large ribosomal subunit
H1990904cellular_componentribonucleoprotein complex
I0000463biological_processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
I0000470biological_processmaturation of LSU-rRNA
I0002181biological_processcytoplasmic translation
I0003723molecular_functionRNA binding
I0003735molecular_functionstructural constituent of ribosome
I0005737cellular_componentcytoplasm
I0005829cellular_componentcytosol
I0005840cellular_componentribosome
I0022625cellular_componentcytosolic large ribosomal subunit
I0042273biological_processribosomal large subunit biogenesis
I1990904cellular_componentribonucleoprotein complex
J0000470biological_processmaturation of LSU-rRNA
J0002181biological_processcytoplasmic translation
J0003723molecular_functionRNA binding
J0003735molecular_functionstructural constituent of ribosome
J0005737cellular_componentcytoplasm
J0005829cellular_componentcytosol
J0005840cellular_componentribosome
J0022625cellular_componentcytosolic large ribosomal subunit
J0042254biological_processribosome biogenesis
J0043232cellular_componentintracellular non-membrane-bounded organelle
J1990904cellular_componentribonucleoprotein complex
K0002181biological_processcytoplasmic translation
K0003735molecular_functionstructural constituent of ribosome
K0005737cellular_componentcytoplasm
K0005829cellular_componentcytosol
K0005840cellular_componentribosome
K0006412biological_processtranslation
K0019843molecular_functionrRNA binding
K0022625cellular_componentcytosolic large ribosomal subunit
K1990904cellular_componentribonucleoprotein complex
L0000027biological_processribosomal large subunit assembly
L0002181biological_processcytoplasmic translation
L0003735molecular_functionstructural constituent of ribosome
L0005737cellular_componentcytoplasm
L0005829cellular_componentcytosol
L0005840cellular_componentribosome
L0006412biological_processtranslation
L0006415biological_processtranslational termination
L0022625cellular_componentcytosolic large ribosomal subunit
L1990904cellular_componentribonucleoprotein complex
M0000027biological_processribosomal large subunit assembly
M0002181biological_processcytoplasmic translation
M0003723molecular_functionRNA binding
M0003735molecular_functionstructural constituent of ribosome
M0005634cellular_componentnucleus
M0005737cellular_componentcytoplasm
M0005829cellular_componentcytosol
M0005840cellular_componentribosome
M0006412biological_processtranslation
M0019843molecular_functionrRNA binding
M0022625cellular_componentcytosolic large ribosomal subunit
M1990904cellular_componentribonucleoprotein complex
N0002181biological_processcytoplasmic translation
N0003723molecular_functionRNA binding
N0003735molecular_functionstructural constituent of ribosome
N0005737cellular_componentcytoplasm
N0005829cellular_componentcytosol
N0005840cellular_componentribosome
N0006412biological_processtranslation
N0022625cellular_componentcytosolic large ribosomal subunit
N1990904cellular_componentribonucleoprotein complex
O0002181biological_processcytoplasmic translation
O0003723molecular_functionRNA binding
O0003735molecular_functionstructural constituent of ribosome
O0005737cellular_componentcytoplasm
O0005829cellular_componentcytosol
O0005840cellular_componentribosome
O0006412biological_processtranslation
O0016236biological_processmacroautophagy
O0022625cellular_componentcytosolic large ribosomal subunit
O0032991cellular_componentprotein-containing complex
O0042273biological_processribosomal large subunit biogenesis
O0043229cellular_componentintracellular organelle
O1990904cellular_componentribonucleoprotein complex
Q0002181biological_processcytoplasmic translation
Q0003735molecular_functionstructural constituent of ribosome
Q0005737cellular_componentcytoplasm
Q0005829cellular_componentcytosol
Q0005840cellular_componentribosome
Q0006412biological_processtranslation
Q0008270molecular_functionzinc ion binding
Q0022625cellular_componentcytosolic large ribosomal subunit
Q0044391cellular_componentribosomal subunit
Q0046677biological_processresponse to antibiotic
Q0046898biological_processresponse to cycloheximide
Q1990904cellular_componentribonucleoprotein complex
R0002181biological_processcytoplasmic translation
R0003735molecular_functionstructural constituent of ribosome
R0005737cellular_componentcytoplasm
R0005829cellular_componentcytosol
R0005840cellular_componentribosome
R0006412biological_processtranslation
R0022625cellular_componentcytosolic large ribosomal subunit
R0044391cellular_componentribosomal subunit
R0046872molecular_functionmetal ion binding
R0070180molecular_functionlarge ribosomal subunit rRNA binding
R1990904cellular_componentribonucleoprotein complex
V0000055biological_processribosomal large subunit export from nucleus
V0005634cellular_componentnucleus
V0005654cellular_componentnucleoplasm
V0005737cellular_componentcytoplasm
V0005829cellular_componentcytosol
V0015031biological_processprotein transport
V0043023molecular_functionribosomal large subunit binding
V0070180molecular_functionlarge ribosomal subunit rRNA binding
W0000027biological_processribosomal large subunit assembly
W0000054biological_processribosomal subunit export from nucleus
W0000166molecular_functionnucleotide binding
W0003729molecular_functionmRNA binding
W0003924molecular_functionGTPase activity
W0005515molecular_functionprotein binding
W0005525molecular_functionGTP binding
W0005737cellular_componentcytoplasm
W0005829cellular_componentcytosol
W0015031biological_processprotein transport
W0016787molecular_functionhydrolase activity
W0022625cellular_componentcytosolic large ribosomal subunit
W0043332cellular_componentmating projection tip
X0000054biological_processribosomal subunit export from nucleus
X0000460biological_processmaturation of 5.8S rRNA
X0000463biological_processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
X0000466biological_processmaturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
X0000470biological_processmaturation of LSU-rRNA
X0003743molecular_functiontranslation initiation factor activity
X0005515molecular_functionprotein binding
X0005634cellular_componentnucleus
X0005730cellular_componentnucleolus
X0005737cellular_componentcytoplasm
X0005829cellular_componentcytosol
X0006364biological_processrRNA processing
X0006412biological_processtranslation
X0006413biological_processtranslational initiation
X0030687cellular_componentpreribosome, large subunit precursor
X0042254biological_processribosome biogenesis
X0042256biological_processcytosolic ribosome assembly
X0042273biological_processribosomal large subunit biogenesis
X0043022molecular_functionribosome binding
X0043023molecular_functionribosomal large subunit binding
X1902626biological_processassembly of large subunit precursor of preribosome
a0002181biological_processcytoplasmic translation
a0003723molecular_functionRNA binding
a0003735molecular_functionstructural constituent of ribosome
a0005737cellular_componentcytoplasm
a0005829cellular_componentcytosol
a0005840cellular_componentribosome
a0006412biological_processtranslation
a0022625cellular_componentcytosolic large ribosomal subunit
a0022626cellular_componentcytosolic ribosome
a1990904cellular_componentribonucleoprotein complex
b0002181biological_processcytoplasmic translation
b0003723molecular_functionRNA binding
b0003729molecular_functionmRNA binding
b0003735molecular_functionstructural constituent of ribosome
b0005737cellular_componentcytoplasm
b0005829cellular_componentcytosol
b0005840cellular_componentribosome
b0006412biological_processtranslation
b0015934cellular_componentlarge ribosomal subunit
b0017148biological_processnegative regulation of translation
b0022625cellular_componentcytosolic large ribosomal subunit
b1990904cellular_componentribonucleoprotein complex
c0000448biological_processcleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
c0002181biological_processcytoplasmic translation
c0003735molecular_functionstructural constituent of ribosome
c0005737cellular_componentcytoplasm
c0005829cellular_componentcytosol
c0005840cellular_componentribosome
c0006412biological_processtranslation
c0015934cellular_componentlarge ribosomal subunit
c0022625cellular_componentcytosolic large ribosomal subunit
c0030687cellular_componentpreribosome, large subunit precursor
c1990904cellular_componentribonucleoprotein complex
d0002181biological_processcytoplasmic translation
d0003723molecular_functionRNA binding
d0003735molecular_functionstructural constituent of ribosome
d0005737cellular_componentcytoplasm
d0005829cellular_componentcytosol
d0005840cellular_componentribosome
d0006412biological_processtranslation
d0022625cellular_componentcytosolic large ribosomal subunit
d0043232cellular_componentintracellular non-membrane-bounded organelle
d1990904cellular_componentribonucleoprotein complex
e0002181biological_processcytoplasmic translation
e0003723molecular_functionRNA binding
e0003735molecular_functionstructural constituent of ribosome
e0005737cellular_componentcytoplasm
e0005829cellular_componentcytosol
e0005840cellular_componentribosome
e0006412biological_processtranslation
e0022625cellular_componentcytosolic large ribosomal subunit
e1990904cellular_componentribonucleoprotein complex
f0002181biological_processcytoplasmic translation
f0003735molecular_functionstructural constituent of ribosome
f0005737cellular_componentcytoplasm
f0005829cellular_componentcytosol
f0005840cellular_componentribosome
f0006412biological_processtranslation
f0022625cellular_componentcytosolic large ribosomal subunit
f1990904cellular_componentribonucleoprotein complex
g0002181biological_processcytoplasmic translation
g0003735molecular_functionstructural constituent of ribosome
g0005737cellular_componentcytoplasm
g0005829cellular_componentcytosol
g0005840cellular_componentribosome
g0006412biological_processtranslation
g0022625cellular_componentcytosolic large ribosomal subunit
g1990904cellular_componentribonucleoprotein complex
h0002181biological_processcytoplasmic translation
h0003723molecular_functionRNA binding
h0003735molecular_functionstructural constituent of ribosome
h0005737cellular_componentcytoplasm
h0005829cellular_componentcytosol
h0005840cellular_componentribosome
h0006412biological_processtranslation
h0022625cellular_componentcytosolic large ribosomal subunit
h1990904cellular_componentribonucleoprotein complex
i0002181biological_processcytoplasmic translation
i0003735molecular_functionstructural constituent of ribosome
i0005737cellular_componentcytoplasm
i0005829cellular_componentcytosol
i0005840cellular_componentribosome
i0006412biological_processtranslation
i0022625cellular_componentcytosolic large ribosomal subunit
i0070180molecular_functionlarge ribosomal subunit rRNA binding
i1990904cellular_componentribonucleoprotein complex
j0002181biological_processcytoplasmic translation
j0003723molecular_functionRNA binding
j0003729molecular_functionmRNA binding
j0003735molecular_functionstructural constituent of ribosome
j0005737cellular_componentcytoplasm
j0005829cellular_componentcytosol
j0005840cellular_componentribosome
j0022625cellular_componentcytosolic large ribosomal subunit
j1990904cellular_componentribonucleoprotein complex
k0000027biological_processribosomal large subunit assembly
k0002181biological_processcytoplasmic translation
k0003723molecular_functionRNA binding
k0003735molecular_functionstructural constituent of ribosome
k0005515molecular_functionprotein binding
k0005737cellular_componentcytoplasm
k0005829cellular_componentcytosol
k0005840cellular_componentribosome
k0006412biological_processtranslation
k0019843molecular_functionrRNA binding
k0022625cellular_componentcytosolic large ribosomal subunit
k0030687cellular_componentpreribosome, large subunit precursor
k1990904cellular_componentribonucleoprotein complex
l0002181biological_processcytoplasmic translation
l0003723molecular_functionRNA binding
l0003735molecular_functionstructural constituent of ribosome
l0005737cellular_componentcytoplasm
l0005829cellular_componentcytosol
l0005840cellular_componentribosome
l0006412biological_processtranslation
l0015934cellular_componentlarge ribosomal subunit
l0022625cellular_componentcytosolic large ribosomal subunit
l0042273biological_processribosomal large subunit biogenesis
l1990904cellular_componentribonucleoprotein complex
m0002181biological_processcytoplasmic translation
m0003735molecular_functionstructural constituent of ribosome
m0005737cellular_componentcytoplasm
m0005829cellular_componentcytosol
m0005840cellular_componentribosome
m0006412biological_processtranslation
m0022625cellular_componentcytosolic large ribosomal subunit
m1990904cellular_componentribonucleoprotein complex
n0002181biological_processcytoplasmic translation
n0003723molecular_functionRNA binding
n0003735molecular_functionstructural constituent of ribosome
n0005634cellular_componentnucleus
n0005737cellular_componentcytoplasm
n0005829cellular_componentcytosol
n0005840cellular_componentribosome
n0006412biological_processtranslation
n0015934cellular_componentlarge ribosomal subunit
n0022625cellular_componentcytosolic large ribosomal subunit
n0043232cellular_componentintracellular non-membrane-bounded organelle
n1990904cellular_componentribonucleoprotein complex
o0002181biological_processcytoplasmic translation
o0003735molecular_functionstructural constituent of ribosome
o0005737cellular_componentcytoplasm
o0005829cellular_componentcytosol
o0005840cellular_componentribosome
o0006412biological_processtranslation
o0022625cellular_componentcytosolic large ribosomal subunit
o1990904cellular_componentribonucleoprotein complex
p0002181biological_processcytoplasmic translation
p0003723molecular_functionRNA binding
p0003735molecular_functionstructural constituent of ribosome
p0005737cellular_componentcytoplasm
p0005829cellular_componentcytosol
p0005840cellular_componentribosome
p0006364biological_processrRNA processing
p0022625cellular_componentcytosolic large ribosomal subunit
p0030627molecular_functionpre-mRNA 5'-splice site binding
p0048025biological_processnegative regulation of mRNA splicing, via spliceosome
p1990904cellular_componentribonucleoprotein complex
q0002181biological_processcytoplasmic translation
q0003735molecular_functionstructural constituent of ribosome
q0005737cellular_componentcytoplasm
q0005829cellular_componentcytosol
q0005840cellular_componentribosome
q0006412biological_processtranslation
q0006450biological_processregulation of translational fidelity
q0022625cellular_componentcytosolic large ribosomal subunit
q1990904cellular_componentribonucleoprotein complex
r0002181biological_processcytoplasmic translation
r0003735molecular_functionstructural constituent of ribosome
r0005737cellular_componentcytoplasm
r0005829cellular_componentcytosol
r0005840cellular_componentribosome
r0006412biological_processtranslation
r0022625cellular_componentcytosolic large ribosomal subunit
r1990904cellular_componentribonucleoprotein complex
s0002181biological_processcytoplasmic translation
s0003735molecular_functionstructural constituent of ribosome
s0005737cellular_componentcytoplasm
s0005829cellular_componentcytosol
s0005840cellular_componentribosome
s0006412biological_processtranslation
s0022625cellular_componentcytosolic large ribosomal subunit
s0042273biological_processribosomal large subunit biogenesis
s1990904cellular_componentribonucleoprotein complex
t0002181biological_processcytoplasmic translation
t0003735molecular_functionstructural constituent of ribosome
t0005737cellular_componentcytoplasm
t0005829cellular_componentcytosol
t0005840cellular_componentribosome
t0006412biological_processtranslation
t0022625cellular_componentcytosolic large ribosomal subunit
t0030687cellular_componentpreribosome, large subunit precursor
t0042254biological_processribosome biogenesis
t1990904cellular_componentribonucleoprotein complex
u0000463biological_processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
u0002181biological_processcytoplasmic translation
u0003729molecular_functionmRNA binding
u0003735molecular_functionstructural constituent of ribosome
u0005737cellular_componentcytoplasm
u0005829cellular_componentcytosol
u0005840cellular_componentribosome
u0006412biological_processtranslation
u0022625cellular_componentcytosolic large ribosomal subunit
u0030687cellular_componentpreribosome, large subunit precursor
u1990904cellular_componentribonucleoprotein complex
v0002181biological_processcytoplasmic translation
v0003723molecular_functionRNA binding
v0003735molecular_functionstructural constituent of ribosome
v0005737cellular_componentcytoplasm
v0005829cellular_componentcytosol
v0005840cellular_componentribosome
v0006412biological_processtranslation
v0022625cellular_componentcytosolic large ribosomal subunit
v1990904cellular_componentribonucleoprotein complex
w0000448biological_processcleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
w0002181biological_processcytoplasmic translation
w0003723molecular_functionRNA binding
w0003735molecular_functionstructural constituent of ribosome
w0005737cellular_componentcytoplasm
w0005829cellular_componentcytosol
w0005840cellular_componentribosome
w0006412biological_processtranslation
w0008270molecular_functionzinc ion binding
w0019843molecular_functionrRNA binding
w0022625cellular_componentcytosolic large ribosomal subunit
w0030687cellular_componentpreribosome, large subunit precursor
w0044391cellular_componentribosomal subunit
w0046872molecular_functionmetal ion binding
w1990904cellular_componentribonucleoprotein complex
x0002181biological_processcytoplasmic translation
x0003735molecular_functionstructural constituent of ribosome
x0005737cellular_componentcytoplasm
x0005829cellular_componentcytosol
x0005840cellular_componentribosome
x0006412biological_processtranslation
x0022618biological_processprotein-RNA complex assembly
x0022625cellular_componentcytosolic large ribosomal subunit
x1990904cellular_componentribonucleoprotein complex
y0002181biological_processcytoplasmic translation
y0003735molecular_functionstructural constituent of ribosome
y0005515molecular_functionprotein binding
y0005737cellular_componentcytoplasm
y0005829cellular_componentcytosol
y0005840cellular_componentribosome
y0006412biological_processtranslation
y0022625cellular_componentcytosolic large ribosomal subunit
y1990904cellular_componentribonucleoprotein complex
z0000027biological_processribosomal large subunit assembly
z0000055biological_processribosomal large subunit export from nucleus
z0002181biological_processcytoplasmic translation
z0003735molecular_functionstructural constituent of ribosome
z0005634cellular_componentnucleus
z0005737cellular_componentcytoplasm
z0005829cellular_componentcytosol
z0005840cellular_componentribosome
z0006412biological_processtranslation
z0008270molecular_functionzinc ion binding
z0016567biological_processprotein ubiquitination
z0019941biological_processmodification-dependent protein catabolic process
z0022625cellular_componentcytosolic large ribosomal subunit
z0031386molecular_functionprotein tag activity
z0031625molecular_functionubiquitin protein ligase binding
z0042254biological_processribosome biogenesis
z1990904cellular_componentribonucleoprotein complex
Functional Information from PDB Data
site_idAC1
Number of Residues3
Detailsbinding site for residue MG A 3402
ChainResidue
AA39
AG41
AC42

site_idAC2
Number of Residues3
Detailsbinding site for residue MG A 3403
ChainResidue
AG41
AC42
AG2412

site_idAC3
Number of Residues2
Detailsbinding site for residue MG A 3404
ChainResidue
AA49
AU97

site_idAC4
Number of Residues1
Detailsbinding site for residue MG A 3405
ChainResidue
AA52

site_idAC5
Number of Residues1
Detailsbinding site for residue MG A 3406
ChainResidue
AA62

site_idAC6
Number of Residues1
Detailsbinding site for residue MG A 3407
ChainResidue
AA63

site_idAC7
Number of Residues2
Detailsbinding site for residue MG A 3408
ChainResidue
AA77
AU78

site_idAC8
Number of Residues3
Detailsbinding site for residue MG A 3409
ChainResidue
AA324
AA325
AU326

site_idAC9
Number of Residues1
Detailsbinding site for residue MG A 3410
ChainResidue
AC340

site_idAD1
Number of Residues2
Detailsbinding site for residue MG A 3411
ChainResidue
AG345
AA348

site_idAD2
Number of Residues1
Detailsbinding site for residue MG A 3412
ChainResidue
AG658

site_idAD3
Number of Residues1
Detailsbinding site for residue MG A 3413
ChainResidue
AC804

site_idAD4
Number of Residues3
Detailsbinding site for residue MG A 3414
ChainResidue
AC861
AU862
AC893

site_idAD5
Number of Residues2
Detailsbinding site for residue MG A 3415
ChainResidue
AC863
AC893

site_idAD6
Number of Residues3
Detailsbinding site for residue MG A 3416
ChainResidue
AG875
AU2949
ELYS241

site_idAD7
Number of Residues1
Detailsbinding site for residue MG A 3417
ChainResidue
AG875

site_idAD8
Number of Residues2
Detailsbinding site for residue MG A 3418
ChainResidue
AA883
AC1846

site_idAD9
Number of Residues3
Detailsbinding site for residue MG A 3419
ChainResidue
AA915
AG916
AA2958

site_idAE1
Number of Residues2
Detailsbinding site for residue MG A 3420
ChainResidue
AG916
AG2957

site_idAE2
Number of Residues2
Detailsbinding site for residue MG A 3421
ChainResidue
AU919
AU922

site_idAE3
Number of Residues1
Detailsbinding site for residue MG A 3422
ChainResidue
AU939

site_idAE4
Number of Residues2
Detailsbinding site for residue MG A 3423
ChainResidue
AU942
AG1434

site_idAE5
Number of Residues3
Detailsbinding site for residue MG A 3424
ChainResidue
AC948
AA1366
AG1367

site_idAE6
Number of Residues2
Detailsbinding site for residue MG A 3425
ChainResidue
AG950
AG1367

site_idAE7
Number of Residues1
Detailsbinding site for residue MG A 3426
ChainResidue
AC961

site_idAE8
Number of Residues2
Detailsbinding site for residue MG A 3427
ChainResidue
AG963
AG1115

site_idAE9
Number of Residues1
Detailsbinding site for residue MG A 3428
ChainResidue
AU995

site_idAF1
Number of Residues2
Detailsbinding site for residue MG A 3430
ChainResidue
AG1116
AG1117

site_idAF2
Number of Residues1
Detailsbinding site for residue MG A 3431
ChainResidue
AA1133

site_idAF3
Number of Residues1
Detailsbinding site for residue MG A 3432
ChainResidue
AC1141

site_idAF4
Number of Residues2
Detailsbinding site for residue MG A 3433
ChainResidue
AA645
AA1143

site_idAF5
Number of Residues2
Detailsbinding site for residue MG A 3435
ChainResidue
AA1150
AU1151

site_idAF6
Number of Residues3
Detailsbinding site for residue MG A 3436
ChainResidue
AA1169
AA1170
IPRO217

site_idAF7
Number of Residues1
Detailsbinding site for residue MG A 3437
ChainResidue
AG1300

site_idAF8
Number of Residues1
Detailsbinding site for residue MG A 3439
ChainResidue
AA1369

site_idAF9
Number of Residues1
Detailsbinding site for residue MG A 3440
ChainResidue
AA1393

site_idAG1
Number of Residues3
Detailsbinding site for residue MG A 3441
ChainResidue
AA396
AA399
AG1417

site_idAG2
Number of Residues2
Detailsbinding site for residue MG A 3442
ChainResidue
AA1433
AG1434

site_idAG3
Number of Residues2
Detailsbinding site for residue MG A 3443
ChainResidue
AA1449
AU2349

site_idAG4
Number of Residues2
Detailsbinding site for residue MG A 3444
ChainResidue
AA1449
AG1450

site_idAG5
Number of Residues2
Detailsbinding site for residue MG A 3445
ChainResidue
AC1478
AU1871

site_idAG6
Number of Residues2
Detailsbinding site for residue MG A 3446
ChainResidue
AG1488
AU1837

site_idAG7
Number of Residues3
Detailsbinding site for residue MG A 3447
ChainResidue
AG1507
AC1508
AA1509

site_idAG8
Number of Residues2
Detailsbinding site for residue MG A 3448
ChainResidue
AC1532
AG1586

site_idAG9
Number of Residues2
Detailsbinding site for residue MG A 3449
ChainResidue
AG1590
AG1592

site_idAH1
Number of Residues4
Detailsbinding site for residue MG A 3450
ChainResidue
AG1488
AA1605
AA1835
AC1836

site_idAH2
Number of Residues4
Detailsbinding site for residue MG A 3451
ChainResidue
AA1901
AG1902
AU1903
AA2919

site_idAH3
Number of Residues2
Detailsbinding site for residue MG A 3452
ChainResidue
AG1902
AU1903

site_idAH4
Number of Residues3
Detailsbinding site for residue MG A 3453
ChainResidue
AA2138
AU2140
AU2141

site_idAH5
Number of Residues1
Detailsbinding site for residue MG A 3454
ChainResidue
AC2146

site_idAH6
Number of Residues1
Detailsbinding site for residue MG A 3456
ChainResidue
AA2279

site_idAH7
Number of Residues2
Detailsbinding site for residue MG A 3457
ChainResidue
AA2312
AA2313

site_idAH8
Number of Residues2
Detailsbinding site for residue MG A 3458
ChainResidue
AC2329
AU2920

site_idAH9
Number of Residues1
Detailsbinding site for residue MG A 3459
ChainResidue
AG652

site_idAI1
Number of Residues1
Detailsbinding site for residue MG A 3460
ChainResidue
AA2367

site_idAI2
Number of Residues2
Detailsbinding site for residue MG A 3461
ChainResidue
AG635
AU2379

site_idAI3
Number of Residues1
Detailsbinding site for residue MG A 3462
ChainResidue
AG2874

site_idAI4
Number of Residues2
Detailsbinding site for residue MG A 3463
ChainResidue
AC2616
AU2617

site_idAI5
Number of Residues2
Detailsbinding site for residue MG A 3464
ChainResidue
AA2413
AU2612

site_idAI6
Number of Residues2
Detailsbinding site for residue MG A 3465
ChainResidue
AU2416
AG2607

site_idAI7
Number of Residues1
Detailsbinding site for residue MG A 3466
ChainResidue
AG2639

site_idAI8
Number of Residues2
Detailsbinding site for residue MG A 3467
ChainResidue
AG2658
AC2755

site_idAI9
Number of Residues3
Detailsbinding site for residue MG A 3468
ChainResidue
AG644
AA2817
AU2868

site_idAJ1
Number of Residues4
Detailsbinding site for residue MG A 3469
ChainResidue
AA2817
AU2866
AC2867
AU2868

site_idAJ2
Number of Residues3
Detailsbinding site for residue MG A 3470
ChainResidue
AA2402
AG2403
AG2871

site_idAJ3
Number of Residues2
Detailsbinding site for residue MG A 3471
ChainResidue
AA2398
AG2874

site_idAJ4
Number of Residues1
Detailsbinding site for residue MG A 3472
ChainResidue
AA2887

site_idAJ5
Number of Residues3
Detailsbinding site for residue MG A 3473
ChainResidue
AC2942
AG2943
AU2944

site_idAJ6
Number of Residues5
Detailsbinding site for residue MG A 3474
ChainResidue
AG2394
AG2395
AU2944
AG2945
AA2946

site_idAJ7
Number of Residues1
Detailsbinding site for residue MG A 3475
ChainResidue
AA2956

site_idAJ8
Number of Residues2
Detailsbinding site for residue MG A 3476
ChainResidue
AG1178
AA1179

site_idAJ9
Number of Residues2
Detailsbinding site for residue MG A 3477
ChainResidue
AG2874
AG2945

site_idAK1
Number of Residues1
Detailsbinding site for residue MG A 3478
ChainResidue
AU2611

site_idAK2
Number of Residues2
Detailsbinding site for residue MG A 3479
ChainResidue
AU1436
AC1437

site_idAK3
Number of Residues1
Detailsbinding site for residue MG A 3480
ChainResidue
AA997

site_idAK4
Number of Residues4
Detailsbinding site for residue MG A 3481
ChainResidue
AC2616
AC2622
AG2623
AG2624

site_idAK5
Number of Residues2
Detailsbinding site for residue MG A 3482
ChainResidue
AA2188
AU2189

site_idAK6
Number of Residues1
Detailsbinding site for residue MG A 3483
ChainResidue
AC2959

site_idAK7
Number of Residues5
Detailsbinding site for residue MG A 3484
ChainResidue
AC2197
AU2200
AG2201
AU2241
AMG3486

site_idAK8
Number of Residues3
Detailsbinding site for residue MG A 3485
ChainResidue
AC2197
AA2198
AG2199

site_idAK9
Number of Residues3
Detailsbinding site for residue MG A 3486
ChainResidue
AG2240
AU2241
AMG3484

site_idAL1
Number of Residues1
Detailsbinding site for residue MG A 3487
ChainResidue
AG2239

site_idAL2
Number of Residues4
Detailsbinding site for residue MG A 3488
ChainResidue
AG2606
AG2607
AG2608
AMG3489

site_idAL3
Number of Residues3
Detailsbinding site for residue MG A 3489
ChainResidue
AU2423
AG2606
AMG3488

site_idAL4
Number of Residues4
Detailsbinding site for residue MG A 3490
ChainResidue
AA2147
AU2148
AG2187
DLYS198

site_idAL5
Number of Residues1
Detailsbinding site for residue MG A 3491
ChainResidue
AG878

site_idAL6
Number of Residues1
Detailsbinding site for residue MG A 3492
ChainResidue
AG277

site_idAL7
Number of Residues2
Detailsbinding site for residue MG A 3493
ChainResidue
AG2754
AC2756

site_idAL8
Number of Residues2
Detailsbinding site for residue MG A 3494
ChainResidue
AG2311
AG2961

site_idAL9
Number of Residues4
Detailsbinding site for residue MG A 3495
ChainResidue
AG2311
AA2312
AU2314
AMG3496

site_idAM1
Number of Residues3
Detailsbinding site for residue MG A 3496
ChainResidue
AG2311
AU2962
AMG3495

site_idAM2
Number of Residues3
Detailsbinding site for residue MG A 3497
ChainResidue
AG347
AA348
AA366

site_idAM3
Number of Residues1
Detailsbinding site for residue MG A 3498
ChainResidue
AU2274

site_idAM4
Number of Residues2
Detailsbinding site for residue MG A 3499
ChainResidue
AG2951
AG2952

site_idAM5
Number of Residues4
Detailsbinding site for residue MG A 3500
ChainResidue
AG635
AC636
AC2378
AU2379

site_idAM6
Number of Residues2
Detailsbinding site for residue MG A 3501
ChainResidue
AA806
AG934

site_idAM7
Number of Residues2
Detailsbinding site for residue MG A 3502
ChainResidue
AG267
AA317

site_idAM8
Number of Residues1
Detailsbinding site for residue MG A 3503
ChainResidue
AA2762

site_idAM9
Number of Residues1
Detailsbinding site for residue MG A 3504
ChainResidue
AA917

site_idAN1
Number of Residues3
Detailsbinding site for residue MG A 3505
ChainResidue
AU1398
AA1399
CA9

site_idAN2
Number of Residues1
Detailsbinding site for residue MG A 3506
ChainResidue
AU280

site_idAN3
Number of Residues3
Detailsbinding site for residue MG A 3507
ChainResidue
AC90
AG281
AG282

site_idAN4
Number of Residues3
Detailsbinding site for residue MG A 3508
ChainResidue
AU280
AG282
AG283

site_idAN5
Number of Residues4
Detailsbinding site for residue MG A 3509
ChainResidue
AC958
AC959
AG2800
AA2801

site_idAN6
Number of Residues1
Detailsbinding site for residue MG A 3510
ChainResidue
AA3141

site_idAN7
Number of Residues1
Detailsbinding site for residue MG A 3512
ChainResidue
AG964

site_idAN8
Number of Residues3
Detailsbinding site for residue MG A 3513
ChainResidue
AG404
AU405
AG406

site_idAN9
Number of Residues1
Detailsbinding site for residue MG A 3514
ChainResidue
AC2389

site_idAO1
Number of Residues2
Detailsbinding site for residue MG A 3515
ChainResidue
AA1896
AG1897

site_idAO2
Number of Residues2
Detailsbinding site for residue MG A 3516
ChainResidue
AA660
AU1430

site_idAO3
Number of Residues5
Detailsbinding site for residue MG A 3517
ChainResidue
AC663
AU664
AU797
AG798
AG799

site_idAO4
Number of Residues2
Detailsbinding site for residue MG A 3518
ChainResidue
AU1173
AG1174

site_idAO5
Number of Residues1
Detailsbinding site for residue MG A 3519
ChainResidue
AA2125

site_idAO6
Number of Residues3
Detailsbinding site for residue MG A 3520
ChainResidue
AC1496
AC1497
AG1514

site_idAO7
Number of Residues1
Detailsbinding site for residue MG A 3522
ChainResidue
AA2643

site_idAO8
Number of Residues2
Detailsbinding site for residue MG A 3523
ChainResidue
AA3087
ELYS364

site_idAO9
Number of Residues3
Detailsbinding site for residue MG A 3524
ChainResidue
AG2370
AG2371
AG2375

site_idAP1
Number of Residues1
Detailsbinding site for residue MG A 3525
ChainResidue
AA2808

site_idAP2
Number of Residues2
Detailsbinding site for residue MG A 3526
ChainResidue
AC2359
AG2400

site_idAP3
Number of Residues4
Detailsbinding site for residue MG A 3527
ChainResidue
AG2185
AA2243
AA2244
AU2314

site_idAP4
Number of Residues1
Detailsbinding site for residue MG A 3528
ChainResidue
AA1933

site_idAP5
Number of Residues2
Detailsbinding site for residue MG A 3529
ChainResidue
AG86
AC702

site_idAP6
Number of Residues1
Detailsbinding site for residue MG A 3531
ChainResidue
AG2376

site_idAP7
Number of Residues2
Detailsbinding site for residue MG A 3532
ChainResidue
AC650
AA2872

site_idAP8
Number of Residues1
Detailsbinding site for residue MG A 3533
ChainResidue
AG2662

site_idAP9
Number of Residues1
Detailsbinding site for residue MG A 3534
ChainResidue
AG2794

site_idAQ1
Number of Residues3
Detailsbinding site for residue MG A 3535
ChainResidue
AA2348
AU2349
AG2391

site_idAQ2
Number of Residues2
Detailsbinding site for residue MG A 3536
ChainResidue
AG345
FGLY97

site_idAQ3
Number of Residues1
Detailsbinding site for residue MG A 3537
ChainResidue
AC2132

site_idAQ4
Number of Residues1
Detailsbinding site for residue MG A 3538
ChainResidue
AC1844

site_idAQ5
Number of Residues3
Detailsbinding site for residue MG A 3539
ChainResidue
AG304
AG2777
AG2778

site_idAQ6
Number of Residues1
Detailsbinding site for residue MG A 3540
ChainResidue
AG2871

site_idAQ7
Number of Residues2
Detailsbinding site for residue MG A 3541
ChainResidue
AA65
AA66

site_idAQ8
Number of Residues1
Detailsbinding site for residue MG A 3542
ChainResidue
AA1908

site_idAQ9
Number of Residues4
Detailsbinding site for residue MG A 3543
ChainResidue
AG1897
AG1898
AG2335
AC2337

site_idAR1
Number of Residues5
Detailsbinding site for residue MG A 3544
ChainResidue
AG2414
AC2415
AU2613
AG2805
AU2806

site_idAR2
Number of Residues3
Detailsbinding site for residue MG A 3545
ChainResidue
AG1604
AA1605
AC1836

site_idAR3
Number of Residues4
Detailsbinding site for residue MG A 3546
ChainResidue
AU640
AA645
AA646
rASP39

site_idAR4
Number of Residues3
Detailsbinding site for residue MG A 3547
ChainResidue
AU871
AU2141
AA2142

site_idAR5
Number of Residues4
Detailsbinding site for residue MG A 3548
ChainResidue
AG274
AU275
AA289
AG290

site_idAR6
Number of Residues2
Detailsbinding site for residue K A 3549
ChainResidue
AA409
AU410

site_idAR7
Number of Residues3
Detailsbinding site for residue K A 3550
ChainResidue
AA816
AA817
AU819

site_idAR8
Number of Residues2
Detailsbinding site for residue MG B 201
ChainResidue
AC1156
BG85

site_idAR9
Number of Residues1
Detailsbinding site for residue MG B 202
ChainResidue
BA45

site_idAS1
Number of Residues1
Detailsbinding site for residue MG B 203
ChainResidue
BA42

site_idAS2
Number of Residues2
Detailsbinding site for residue MG B 204
ChainResidue
BA55
BA56

site_idAS3
Number of Residues2
Detailsbinding site for residue MG B 205
ChainResidue
BG65
BA66

site_idAS4
Number of Residues1
Detailsbinding site for residue MG C 201
ChainResidue
CC35

site_idAS5
Number of Residues2
Detailsbinding site for residue MG C 202
ChainResidue
CC19
CU20

site_idAS6
Number of Residues2
Detailsbinding site for residue MG D 301
ChainResidue
DARG6
DTHR199

site_idAS7
Number of Residues5
Detailsbinding site for residue MG a 301
ChainResidue
AA34
AA810
AU811
aTHR80
aTYR81

site_idAS8
Number of Residues1
Detailsbinding site for residue MG c 201
ChainResidue
cTYR130

site_idAS9
Number of Residues1
Detailsbinding site for residue MG i 201
ChainResidue
iASN47

site_idAT1
Number of Residues14
Detailsbinding site for residue GNP W 701
ChainResidue
WLYS237
WALA265
WLEU266
WASN346
WVAL347
WGLY348
WLYS349
WSER350
WSER351
WSER365
WSER366
WLYS370
WTHR371
WMG702

site_idAT2
Number of Residues4
Detailsbinding site for residue MG W 702
ChainResidue
WSER350
WSER363
WTHR371
WGNP701

Functional Information from PROSITE/UniProt
site_idPS00051
Number of Residues17
DetailsRIBOSOMAL_L39E Ribosomal protein L39e signature. RTnntIryNakrRNWRR
ChainResidueDetails
yARG30-ARG46

site_idPS00474
Number of Residues24
DetailsRIBOSOMAL_L3 Ribosomal protein L3 signature. FeqnemiDaiAvTkGHGfeGvthR
ChainResidueDetails
EPHE209-ARG232

site_idPS00050
Number of Residues16
DetailsRIBOSOMAL_L23 Ribosomal protein L23 signature. KKAYVRLTadydaldI
ChainResidueDetails
kLYS120-ILE135

site_idPS00299
Number of Residues26
DetailsUBIQUITIN_1 Ubiquitin domain signature. KskIqDkegIPpdqQrLIFaGkqleD
ChainResidueDetails
zLYS27-ASP52

site_idPS01106
Number of Residues18
DetailsRIBOSOMAL_L18E Ribosomal protein L18e signature. KaLflSKinRPpVSVsRI
ChainResidueDetails
dLYS50-ILE67

site_idPS01194
Number of Residues24
DetailsRIBOSOMAL_L15E Ribosomal protein L15e signature. DKARrLGYkAkqGFVIYRvRVrRG
ChainResidueDetails
aASP46-GLY69

site_idPS00700
Number of Residues22
DetailsRIBOSOMAL_L6_2 Ribosomal protein L6 signature 2. QicrVrnKdiRkFlDGIYVshK
ChainResidueDetails
KGLN163-LYS184

site_idPS01104
Number of Residues15
DetailsRIBOSOMAL_L13E Ribosomal protein L13e signature. RaGRGFTLaEVkaaG
ChainResidueDetails
NARG70-GLY84

site_idPS01082
Number of Residues18
DetailsRIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CkkmgVPYaiVkGKarLG
ChainResidueDetails
JCYS170-GLY187

site_idPS00526
Number of Residues20
DetailsRIBOSOMAL_L19E Ribosomal protein L19e signature. QKRLaAsvvgVGkrkVWLDP
ChainResidueDetails
eGLN7-PRO26

site_idPS00634
Number of Residues33
DetailsRIBOSOMAL_L30 Ribosomal protein L30 signature. VLqlLrLtRinSgTfvkvtkatleLLklIepYV
ChainResidueDetails
IVAL102-VAL134

site_idPS00049
Number of Residues27
DetailsRIBOSOMAL_L14 Ribosomal protein L14 signature. AIVVrqakswrrr.DGvflyFedNagVI
ChainResidueDetails
iALA76-ILE102

site_idPS01145
Number of Residues14
DetailsRIBOSOMAL_L34E Ribosomal protein L34e signature. TrSnKikvvKTPGG
ChainResidueDetails
tTHR15-GLY28

site_idPS00783
Number of Residues24
DetailsRIBOSOMAL_L13 Ribosomal protein L13 signature. LRGMVShktarGKaalerLkVFeG
ChainResidueDetails
bLEU84-GLY107

site_idPS01077
Number of Residues20
DetailsRIBOSOMAL_L37E Ribosomal protein L37e signature. GTpSfGkRhnks.HtlCnRCG
ChainResidueDetails
wGLY4-GLY23

site_idPS01190
Number of Residues11
DetailsRIBOSOMAL_L36E Ribosomal protein L36e signature. PYERRlIDLIR
ChainResidueDetails
vPRO52-ARG62

site_idPS01257
Number of Residues22
DetailsRIBOSOMAL_L10E Ribosomal protein L10e signature. ADRlqqGMRgAWGKPhGlaARV
ChainResidueDetails
LALA108-VAL129

site_idPS00464
Number of Residues25
DetailsRIBOSOMAL_L22 Ribosomal protein L22 signature. RrrTyRAhGRinkyesspSHIELvV
ChainResidueDetails
cARG126-VAL150

site_idPS00709
Number of Residues25
DetailsRIBOSOMAL_L30E_1 Ribosomal protein L30e signature 1. SgkytlGyKstVKslRqGksKlIII
ChainResidueDetails
pSER20-ILE44

site_idPS00993
Number of Residues21
DetailsRIBOSOMAL_L30E_2 Ribosomal protein L30e signature 2. ELGTavGKlfrvgvVsIlEaG
ChainResidueDetails
pGLU76-GLY96

site_idPS00579
Number of Residues15
DetailsRIBOSOMAL_L29 Ribosomal protein L29 signature. SLPKIKtVRKSIACV
ChainResidueDetails
uSER40-VAL54

site_idPS00475
Number of Residues32
DetailsRIBOSOMAL_L15 Ribosomal protein L15 signature. KILGkGrIpnvp.ViVkarfVSklAeekIraaG
ChainResidueDetails
nLYS111-GLY142

site_idPS01073
Number of Residues18
DetailsRIBOSOMAL_L24E Ribosomal protein L24e signature. FsGakIyPGrGtlFvRgD
ChainResidueDetails
jPHE8-ASP25

site_idPS00580
Number of Residues21
DetailsRIBOSOMAL_L32E Ribosomal protein L32e signature. FkRhhsdRyhRVaen..WRKqkG
ChainResidueDetails
rPHE17-GLY37

site_idPS01107
Number of Residues12
DetailsRIBOSOMAL_L27E Ribosomal protein L27e signature. GKNqWFFskLRF
ChainResidueDetails
mGLY125-PHE136

site_idPS01170
Number of Residues19
DetailsRIBOSOMAL_L6E Ribosomal protein L6e signature. NgvPLRRvnarYVIATSt.K
ChainResidueDetails
HASN72-LYS90

site_idPS00467
Number of Residues12
DetailsRIBOSOMAL_L2 Ribosomal protein L2 signature. PktRGVAmNPvD
ChainResidueDetails
DPRO197-ASP208

site_idPS01172
Number of Residues12
DetailsRIBOSOMAL_L44E Ribosomal protein L44e signature. KtTKKvvLRleC
ChainResidueDetails
QLYS63-CYS74

site_idPS01105
Number of Residues22
DetailsRIBOSOMAL_L35AE Ribosomal protein L35Ae signature. GKVtRtHGnsGvVrAtFrnnLP
ChainResidueDetails
sGLY69-PRO90

site_idPS01108
Number of Residues18
DetailsRIBOSOMAL_L24 Ribosomal protein L24 signature. DDeVlVVrGskKGqe.GkI
ChainResidueDetails
lASP53-ILE70

site_idPS01144
Number of Residues15
DetailsRIBOSOMAL_L31E Ribosomal protein L31e signature. VRLApeLNqAiWkRG
ChainResidueDetails
qVAL49-GLY63

site_idPS00358
Number of Residues17
DetailsRIBOSOMAL_L5 Ribosomal protein L5 signature. LeqLSGQtpVqSkARyT
ChainResidueDetails
MLEU37-THR53

site_idPS01171
Number of Residues26
DetailsRIBOSOMAL_L21E Ribosomal protein L21e signature. GDiVdikangsiqk.GmpHkfYqGkTG
ChainResidueDetails
gGLY37-GLY62

site_idPS00939
Number of Residues27
DetailsRIBOSOMAL_L1E Ribosomal protein L1e signature. NhneKryATaSAIaATAvaslvlaRGH
ChainResidueDetails
FASN114-HIS140

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBINDING: BINDING => ECO:0000255
ChainResidueDetails
pLYS53
WASN236
WASP387
pLYS83

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING: BINDING => ECO:0000305
ChainResidueDetails
eLYS186
WGLY343
zLYS93
wCYS34
wCYS37
eLYS146

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:19779198
ChainResidueDetails
LLYS101
DLYS119
DLYS145
WSER99

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:19779198
ChainResidueDetails
ESER297

site_idSWS_FT_FI5
Number of Residues3
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0007744|PubMed:22106047
ChainResidueDetails
ELYS39
ELYS136

218500

PDB entries from 2024-04-17

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