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5T2Y

Crystal Structure of C. jejuni PglD in complex with 5-methyl-4-(methylamino)-2-phenethylthieno[2,3-d]pyrimidine-6-carboxylic acid

Functional Information from GO Data
ChainGOidnamespacecontents
A0006486biological_processprotein glycosylation
A0016746molecular_functionacyltransferase activity
A0016747molecular_functionacyltransferase activity, transferring groups other than amino-acyl groups
A0018279biological_processprotein N-linked glycosylation via asparagine
B0006486biological_processprotein glycosylation
B0016746molecular_functionacyltransferase activity
B0016747molecular_functionacyltransferase activity, transferring groups other than amino-acyl groups
B0018279biological_processprotein N-linked glycosylation via asparagine
Functional Information from PDB Data
site_idAC1
Number of Residues13
Detailsbinding site for residue 753 A 201
ChainResidue
ASER136
AGOL203
AHOH349
AHOH359
AHOH398
AGLY154
AILE155
ALEU160
APRO161
AGLY173
AVAL178
AVAL188
APRO191

site_idAC2
Number of Residues4
Detailsbinding site for residue GOL A 202
ChainResidue
AHOH340
AHOH344
AHOH382
AHOH398

site_idAC3
Number of Residues9
Detailsbinding site for residue GOL A 203
ChainResidue
AHIS125
ASER136
AALA142
AGLY143
APRO161
A753201
AHOH359
AHOH370
AHOH378

site_idAC4
Number of Residues2
Detailsbinding site for residue DMS A 204
ChainResidue
APRO101
AASN106

site_idAC5
Number of Residues9
Detailsbinding site for residue 753 B 201
ChainResidue
BSER136
BPHE152
BGLY154
BILE155
BGLY173
BHOH308
BHOH325
BHOH354
BHOH357

site_idAC6
Number of Residues3
Detailsbinding site for residue GOL B 202
ChainResidue
BHOH301
BHOH323
BHOH357

site_idAC7
Number of Residues5
Detailsbinding site for residue DMS B 203
ChainResidue
BLEU84
BSER86
BILE105
BASN106
BHOH470

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton acceptor => ECO:0000269|PubMed:18667421
ChainResidueDetails
AHIS125
BHIS125

site_idSWS_FT_FI2
Number of Residues6
DetailsBINDING:
ChainResidueDetails
ASER13
AASP35
AGLY56
BSER13
BASP35
BGLY56

site_idSWS_FT_FI3
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:18667421
ChainResidueDetails
AHIS134
AILE155
AGLY173
BHIS134
BILE155
BGLY173

site_idSWS_FT_FI4
Number of Residues2
DetailsSITE: Increases basicity of active site His
ChainResidueDetails
AGLU126
BGLU126

225946

PDB entries from 2024-10-09

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