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5T00

Human CTCF ZnF3-7 and methylated DNA complex

Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 501
ChainResidue
ACYS324
ACYS327
AHIS340
AHIS345

site_idAC2
Number of Residues4
Detailsbinding site for residue ZN A 502
ChainResidue
ACYS353
ACYS356
AHIS369
AHIS373

site_idAC3
Number of Residues4
Detailsbinding site for residue ZN A 503
ChainResidue
ACYS384
AHIS397
AHIS401
ACYS381

site_idAC4
Number of Residues4
Detailsbinding site for residue ZN A 504
ChainResidue
ACYS409
ACYS412
AHIS425
AHIS430

site_idAC5
Number of Residues4
Detailsbinding site for residue ZN A 505
ChainResidue
ACYS439
ACYS442
AHIS455
AHIS460

site_idAC6
Number of Residues4
Detailsbinding site for residue ZN D 501
ChainResidue
DCYS324
DCYS327
DHIS340
DHIS345

site_idAC7
Number of Residues4
Detailsbinding site for residue ZN D 502
ChainResidue
DCYS353
DCYS356
DHIS369
DHIS373

site_idAC8
Number of Residues4
Detailsbinding site for residue ZN D 503
ChainResidue
DCYS381
DCYS384
DHIS397
DHIS401

site_idAC9
Number of Residues4
Detailsbinding site for residue ZN D 504
ChainResidue
DCYS409
DCYS412
DHIS425
DHIS430

site_idAD1
Number of Residues4
Detailsbinding site for residue ZN D 505
ChainResidue
DCYS439
DCYS442
DHIS455
DHIS460

Functional Information from PROSITE/UniProt
site_idPS00028
Number of Residues22
DetailsZINC_FINGER_C2H2_1 Zinc finger C2H2 type domain signature. Cpd..CdmaFvtsgelvrHrryk.H
ChainResidueDetails
ACYS324-HIS345
ACYS409-HIS430
ACYS439-HIS460

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues46
DetailsZinc finger: {"description":"C2H2-type 3","evidences":[{"source":"PROSITE-ProRule","id":"PRU00042","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues44
DetailsZinc finger: {"description":"C2H2-type 4","evidences":[{"source":"PROSITE-ProRule","id":"PRU00042","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues44
DetailsZinc finger: {"description":"C2H2-type 5","evidences":[{"source":"PROSITE-ProRule","id":"PRU00042","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues46
DetailsZinc finger: {"description":"C2H2-type 6","evidences":[{"source":"PROSITE-ProRule","id":"PRU00042","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues46
DetailsZinc finger: {"description":"C2H2-type 7","evidences":[{"source":"PROSITE-ProRule","id":"PRU00042","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues2
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"18669648","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"18669648","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

239803

PDB entries from 2025-08-06

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