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5PGM

SACCHAROMYCES CEREVISIAE PHOSPHOGLYCERATE MUTASE

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0004619molecular_functionphosphoglycerate mutase activity
A0005737cellular_componentcytoplasm
A0005739cellular_componentmitochondrion
A0005741cellular_componentmitochondrial outer membrane
A0005758cellular_componentmitochondrial intermembrane space
A0005829cellular_componentcytosol
A0006094biological_processgluconeogenesis
A0006096biological_processglycolytic process
A0016853molecular_functionisomerase activity
A0016868molecular_functionintramolecular phosphotransferase activity
A0046538molecular_function2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity
B0003824molecular_functioncatalytic activity
B0004619molecular_functionphosphoglycerate mutase activity
B0005737cellular_componentcytoplasm
B0005739cellular_componentmitochondrion
B0005741cellular_componentmitochondrial outer membrane
B0005758cellular_componentmitochondrial intermembrane space
B0005829cellular_componentcytosol
B0006094biological_processgluconeogenesis
B0006096biological_processglycolytic process
B0016853molecular_functionisomerase activity
B0016868molecular_functionintramolecular phosphotransferase activity
B0046538molecular_function2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity
C0003824molecular_functioncatalytic activity
C0004619molecular_functionphosphoglycerate mutase activity
C0005737cellular_componentcytoplasm
C0005739cellular_componentmitochondrion
C0005741cellular_componentmitochondrial outer membrane
C0005758cellular_componentmitochondrial intermembrane space
C0005829cellular_componentcytosol
C0006094biological_processgluconeogenesis
C0006096biological_processglycolytic process
C0016853molecular_functionisomerase activity
C0016868molecular_functionintramolecular phosphotransferase activity
C0046538molecular_function2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity
D0003824molecular_functioncatalytic activity
D0004619molecular_functionphosphoglycerate mutase activity
D0005737cellular_componentcytoplasm
D0005739cellular_componentmitochondrion
D0005741cellular_componentmitochondrial outer membrane
D0005758cellular_componentmitochondrial intermembrane space
D0005829cellular_componentcytosol
D0006094biological_processgluconeogenesis
D0006096biological_processglycolytic process
D0016853molecular_functionisomerase activity
D0016868molecular_functionintramolecular phosphotransferase activity
D0046538molecular_function2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity
E0003824molecular_functioncatalytic activity
E0004619molecular_functionphosphoglycerate mutase activity
E0005737cellular_componentcytoplasm
E0005739cellular_componentmitochondrion
E0005741cellular_componentmitochondrial outer membrane
E0005758cellular_componentmitochondrial intermembrane space
E0005829cellular_componentcytosol
E0006094biological_processgluconeogenesis
E0006096biological_processglycolytic process
E0016853molecular_functionisomerase activity
E0016868molecular_functionintramolecular phosphotransferase activity
E0046538molecular_function2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity
F0003824molecular_functioncatalytic activity
F0004619molecular_functionphosphoglycerate mutase activity
F0005737cellular_componentcytoplasm
F0005739cellular_componentmitochondrion
F0005741cellular_componentmitochondrial outer membrane
F0005758cellular_componentmitochondrial intermembrane space
F0005829cellular_componentcytosol
F0006094biological_processgluconeogenesis
F0006096biological_processglycolytic process
F0016853molecular_functionisomerase activity
F0016868molecular_functionintramolecular phosphotransferase activity
F0046538molecular_function2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity
G0003824molecular_functioncatalytic activity
G0004619molecular_functionphosphoglycerate mutase activity
G0005737cellular_componentcytoplasm
G0005739cellular_componentmitochondrion
G0005741cellular_componentmitochondrial outer membrane
G0005758cellular_componentmitochondrial intermembrane space
G0005829cellular_componentcytosol
G0006094biological_processgluconeogenesis
G0006096biological_processglycolytic process
G0016853molecular_functionisomerase activity
G0016868molecular_functionintramolecular phosphotransferase activity
G0046538molecular_function2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity
H0003824molecular_functioncatalytic activity
H0004619molecular_functionphosphoglycerate mutase activity
H0005737cellular_componentcytoplasm
H0005739cellular_componentmitochondrion
H0005741cellular_componentmitochondrial outer membrane
H0005758cellular_componentmitochondrial intermembrane space
H0005829cellular_componentcytosol
H0006094biological_processgluconeogenesis
H0006096biological_processglycolytic process
H0016853molecular_functionisomerase activity
H0016868molecular_functionintramolecular phosphotransferase activity
H0046538molecular_function2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity
Functional Information from PDB Data
site_idAC1
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 D 300
ChainResidue
DHIS8
DSER11
DASN14
DTHR20
DARG59
DHOH428
DHOH431
DHOH508
DHOH549

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 D 301
ChainResidue
DARG87
DTYR89
DARG113
DARG114
DHOH490
DHOH588

site_idAC3
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 C 300
ChainResidue
CHIS8
CSER11
CASN14
CTHR20
CARG59
CHOH555
CHOH597
CHOH657
CHOH662

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 C 301
ChainResidue
CTYR89
CLYS97
CARG113
CARG114
CHOH616

site_idAC5
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 A 300
ChainResidue
ASER11
AASN14
ATHR20
AARG59
AHOH430
AHOH433
AHOH512
AHOH555
AHOH563

site_idAC6
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 A 301
ChainResidue
AARG87
ATYR89
AARG113
AARG114
AASN183
AHOH493
AHOH506
AHOH553
AHOH603

site_idAC7
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 B 300
ChainResidue
BHIS8
BSER11
BASN14
BTHR20
BARG59
BHOH432
BHOH476
BHOH515
BHOH578

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 301
ChainResidue
BPHE19
BTYR89
BLYS97
BARG113
BHOH495

site_idAC9
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 E 300
ChainResidue
EHOH431
EHOH508
EHOH549
EHIS8
ESER11
EASN14
ETHR20
EARG59
EHOH428

site_idBC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 E 301
ChainResidue
EARG87
ETYR89
EARG113
EARG114
EHOH490
EHOH588

site_idBC2
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 F 300
ChainResidue
FHIS8
FSER11
FASN14
FTHR20
FARG59
FHOH555
FHOH597
FHOH657
FHOH662

site_idBC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 F 301
ChainResidue
FTYR89
FLYS97
FARG113
FARG114
FHOH616

site_idBC4
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 G 300
ChainResidue
GSER11
GASN14
GTHR20
GARG59
GHOH594
GHOH597
GHOH676
GHOH719
GHOH727

site_idBC5
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 G 301
ChainResidue
GARG87
GTYR89
GARG113
GARG114
GASN183
GHOH657
GHOH670
GHOH717
GHOH766

site_idBC6
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 H 300
ChainResidue
HHIS8
HSER11
HASN14
HTHR20
HARG59
HHOH432
HHOH476
HHOH515
HHOH578

site_idBC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 H 301
ChainResidue
HPHE19
HTYR89
HLYS97
HARG113
HHOH495

site_idBC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ALA E 302
ChainResidue
EGLU231
EALA233
EALA234

site_idCIA
Number of Residues4
DetailsCATALYTIC SITE. HIS 8 PHOSPHORYLATION IS REQUIRED TO PRIME THE ENZYME.
ChainResidue
AHIS8
AHIS181
AARG7
AARG59

site_idCIB
Number of Residues4
DetailsCATALYTIC SITE. HIS 8 PHOSPHORYLATION IS REQUIRED TO PRIME THE ENZYME.
ChainResidue
BHIS8
BHIS181
BARG7
BARG59

site_idCIC
Number of Residues4
DetailsCATALYTIC SITE. HIS 8 PHOSPHORYLATION IS REQUIRED TO PRIME THE ENZYME.
ChainResidue
CHIS181
CARG7
CARG59
CHIS8

site_idCID
Number of Residues4
DetailsCATALYTIC SITE. HIS 8 PHOSPHORYLATION IS REQUIRED TO PRIME THE ENZYME.
ChainResidue
DHIS8
DHIS181
DARG7
DARG59

site_idCIE
Number of Residues4
DetailsCATALYTIC SITE. HIS 8 PHOSPHORYLATION IS REQUIRED TO PRIME THE ENZYME.
ChainResidue
EHIS8
EHIS181
EARG7
EARG59

site_idCIF
Number of Residues4
DetailsCATALYTIC SITE. HIS 8 PHOSPHORYLATION IS REQUIRED TO PRIME THE ENZYME.
ChainResidue
FHIS8
FHIS181
FARG7
FARG59

site_idCIG
Number of Residues4
DetailsCATALYTIC SITE. HIS 8 PHOSPHORYLATION IS REQUIRED TO PRIME THE ENZYME.
ChainResidue
GHIS8
GHIS181
GARG7
GARG59

site_idCIH
Number of Residues4
DetailsCATALYTIC SITE. HIS 8 PHOSPHORYLATION IS REQUIRED TO PRIME THE ENZYME.
ChainResidue
HHIS8
HHIS181
HARG7
HARG59

Functional Information from PROSITE/UniProt
site_idPS00175
Number of Residues10
DetailsPG_MUTASE Phosphoglycerate mutase family phosphohistidine signature. LvRHGQsEwN
ChainResidueDetails
DLEU5-ASN14

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsACT_SITE: Tele-phosphohistidine intermediate => ECO:0000269|PubMed:10064712, ECO:0000269|PubMed:10531478, ECO:0000269|PubMed:6115412, ECO:0000269|PubMed:9512715
ChainResidueDetails
DGLY9
CGLY9
AGLY9
BGLY9
EGLY9
FGLY9
GGLY9
HGLY9

site_idSWS_FT_FI2
Number of Residues8
DetailsACT_SITE: Proton donor/acceptor => ECO:0000305|PubMed:10064712
ChainResidueDetails
DARG87
CARG87
AARG87
BARG87
EARG87
FARG87
GARG87
HARG87

site_idSWS_FT_FI3
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:10369755, ECO:0000269|PubMed:10531478, ECO:0000269|PubMed:6115412
ChainResidueDetails
DHIS8
CHIS8
AHIS8
BHIS8
EHIS8
FHIS8
GHIS8
HHIS8

site_idSWS_FT_FI4
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:10369755, ECO:0000269|PubMed:10531478
ChainResidueDetails
DGLY21
CGLY21
AGLY21
BGLY21
EGLY21
FGLY21
GGLY21
HGLY21

site_idSWS_FT_FI5
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:10531478
ChainResidueDetails
DALA60
CALA60
AALA60
BALA60
EALA60
FALA60
GALA60
HALA60

site_idSWS_FT_FI6
Number of Residues16
DetailsBINDING: BINDING => ECO:0000269|PubMed:10369755, ECO:0000269|PubMed:6115412
ChainResidueDetails
DARG87
EASN183
FARG87
FASN183
GARG87
GASN183
HARG87
HASN183
DASN183
CARG87
CASN183
AARG87
AASN183
BARG87
BASN183
EARG87

site_idSWS_FT_FI7
Number of Residues16
DetailsBINDING: BINDING => ECO:0000269|PubMed:10369755
ChainResidueDetails
DALA98
EARG114
FALA98
FARG114
GALA98
GARG114
HALA98
HARG114
DARG114
CALA98
CARG114
AALA98
AARG114
BALA98
BARG114
EALA98

site_idSWS_FT_FI8
Number of Residues8
DetailsSITE: Transition state stabilizer => ECO:0000305|PubMed:10064712
ChainResidueDetails
DGLY182
CGLY182
AGLY182
BGLY182
EGLY182
FGLY182
GGLY182
HGLY182

site_idSWS_FT_FI9
Number of Residues16
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:17287358
ChainResidueDetails
DGLU12
ELEU185
FGLU12
FLEU185
GGLU12
GLEU185
HGLU12
HLEU185
DLEU185
CGLU12
CLEU185
AGLU12
ALEU185
BGLU12
BLEU185
EGLU12

site_idSWS_FT_FI10
Number of Residues8
DetailsMOD_RES: Phosphotyrosine => ECO:0007744|PubMed:19779198
ChainResidueDetails
DPRO49
CPRO49
APRO49
BPRO49
EPRO49
FPRO49
GPRO49
HPRO49

site_idSWS_FT_FI11
Number of Residues8
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:17287358, ECO:0007744|PubMed:17330950, ECO:0007744|PubMed:18407956, ECO:0007744|PubMed:19779198
ChainResidueDetails
DPHE116
CPHE116
APHE116
BPHE116
EPHE116
FPHE116
GPHE116
HPHE116

site_idSWS_FT_FI12
Number of Residues8
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:18407956
ChainResidueDetails
DSER127
CSER127
ASER127
BSER127
ESER127
FSER127
GSER127
HSER127

site_idSWS_FT_FI13
Number of Residues8
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:19779198
ChainResidueDetails
DPRO128
CPRO128
APRO128
BPRO128
EPRO128
FPRO128
GPRO128
HPRO128

site_idSWS_FT_FI14
Number of Residues8
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:18407956, ECO:0007744|PubMed:19779198
ChainResidueDetails
DASP197
CASP197
AASP197
BASP197
EASP197
FASP197
GASP197
HASP197

site_idSWS_FT_FI15
Number of Residues56
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0007744|PubMed:22106047
ChainResidueDetails
DGLY31
CLEU57
CALA71
CTYR139
CTHR175
CHIS191
AGLY31
ALEU57
AALA71
ATYR139
ATHR175
AHIS191
BGLY31
BLEU57
BALA71
BTYR139
BTHR175
BHIS191
EGLY31
DLEU57
ELEU57
EALA71
ETYR139
ETHR175
EHIS191
FGLY31
FLEU57
FALA71
DALA71
FTYR139
FTHR175
FHIS191
GGLY31
GLEU57
GALA71
GTYR139
GTHR175
GHIS191
DTYR139
HGLY31
HLEU57
HALA71
HTYR139
HTHR175
HHIS191
DTHR175
DHIS191
CGLY31

Catalytic Information from CSA
site_idCSA1
Number of Residues4
DetailsAnnotated By Reference To The Literature 1qhf
ChainResidueDetails
DHIS181
DHIS8
DGLU86
DARG59

site_idCSA2
Number of Residues4
DetailsAnnotated By Reference To The Literature 1qhf
ChainResidueDetails
CHIS181
CHIS8
CGLU86
CARG59

site_idCSA3
Number of Residues4
DetailsAnnotated By Reference To The Literature 1qhf
ChainResidueDetails
AHIS181
AHIS8
AGLU86
AARG59

site_idCSA4
Number of Residues4
DetailsAnnotated By Reference To The Literature 1qhf
ChainResidueDetails
BHIS181
BHIS8
BGLU86
BARG59

site_idCSA5
Number of Residues4
DetailsAnnotated By Reference To The Literature 1qhf
ChainResidueDetails
EHIS181
EHIS8
EGLU86
EARG59

site_idCSA6
Number of Residues4
DetailsAnnotated By Reference To The Literature 1qhf
ChainResidueDetails
FHIS181
FHIS8
FGLU86
FARG59

site_idCSA7
Number of Residues4
DetailsAnnotated By Reference To The Literature 1qhf
ChainResidueDetails
GHIS181
GHIS8
GGLU86
GARG59

site_idCSA8
Number of Residues4
DetailsAnnotated By Reference To The Literature 1qhf
ChainResidueDetails
HHIS181
HHIS8
HGLU86
HARG59

site_idMCSA1
Number of Residues4
DetailsM-CSA 504
ChainResidueDetails
DGLY9covalent catalysis
DALA60electrostatic stabiliser
DARG87proton donor, proton shuttle (general acid/base)
DGLY182electrostatic stabiliser

site_idMCSA2
Number of Residues4
DetailsM-CSA 504
ChainResidueDetails
CGLY9covalent catalysis
CALA60electrostatic stabiliser
CARG87proton donor, proton shuttle (general acid/base)
CGLY182electrostatic stabiliser

site_idMCSA3
Number of Residues4
DetailsM-CSA 504
ChainResidueDetails
AGLY9covalent catalysis
AALA60electrostatic stabiliser
AARG87proton donor, proton shuttle (general acid/base)
AGLY182electrostatic stabiliser

site_idMCSA4
Number of Residues4
DetailsM-CSA 504
ChainResidueDetails
BGLY9covalent catalysis
BALA60electrostatic stabiliser
BARG87proton donor, proton shuttle (general acid/base)
BGLY182electrostatic stabiliser

site_idMCSA5
Number of Residues4
DetailsM-CSA 504
ChainResidueDetails
EGLY9covalent catalysis
EALA60electrostatic stabiliser
EARG87proton donor, proton shuttle (general acid/base)
EGLY182electrostatic stabiliser

site_idMCSA6
Number of Residues4
DetailsM-CSA 504
ChainResidueDetails
FGLY9covalent catalysis
FALA60electrostatic stabiliser
FARG87proton donor, proton shuttle (general acid/base)
FGLY182electrostatic stabiliser

site_idMCSA7
Number of Residues4
DetailsM-CSA 504
ChainResidueDetails
GGLY9covalent catalysis
GALA60electrostatic stabiliser
GARG87proton donor, proton shuttle (general acid/base)
GGLY182electrostatic stabiliser

site_idMCSA8
Number of Residues4
DetailsM-CSA 504
ChainResidueDetails
HGLY9covalent catalysis
HALA60electrostatic stabiliser
HARG87proton donor, proton shuttle (general acid/base)
HGLY182electrostatic stabiliser

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PDB entries from 2024-07-24

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