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5OXH

C-terminally retracted ubiquitin T66V/L67N mutant

Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue SO4 A 101
ChainResidue
ATHR12
AILE13
ATHR14
AARG54
AHOH219
AHOH225
AHOH287

site_idAC2
Number of Residues5
Detailsbinding site for residue SO4 A 102
ChainResidue
AGLY75
AHOH205
AHOH291
AARG42
AARG74

site_idAC3
Number of Residues3
Detailsbinding site for residue SO4 A 103
ChainResidue
AARG42
AARG72
AHOH204

site_idAC4
Number of Residues3
Detailsbinding site for residue SO4 A 104
ChainResidue
AGLN49
AARG74
AHOH264

site_idAC5
Number of Residues6
Detailsbinding site for residue SO4 A 105
ChainResidue
AGLU51
AARG54
AHOH207
AHOH213
AHOH223
AHOH292

site_idAC6
Number of Residues6
Detailsbinding site for residue SO4 A 106
ChainResidue
ALYS33
AASN60
ALYS63
AHOH228
AHOH279
AHOH300

site_idAC7
Number of Residues6
Detailsbinding site for residue SO4 A 107
ChainResidue
ASER20
AARG72
AHOH248
AHOH260
AHOH271
AHOH273

site_idAC8
Number of Residues8
Detailsbinding site for residue SO4 A 108
ChainResidue
ALYS6
AASP21
ATHR22
AASN25
AHOH201
AHOH203
AHOH239
AHOH249

Functional Information from PROSITE/UniProt
site_idPS00299
Number of Residues26
DetailsUBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD
ChainResidueDetails
ALYS27-ASP52

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsSITE: Interacts with activating enzyme
ChainResidueDetails
AARG54
AARG72

site_idSWS_FT_FI2
Number of Residues1
DetailsSITE: Essential for function
ChainResidueDetails
AHIS68

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: Phosphoserine; by PINK1 => ECO:0000269|PubMed:24660806, ECO:0000269|PubMed:24751536, ECO:0000269|PubMed:24784582, ECO:0000269|PubMed:25527291
ChainResidueDetails
ASEP65

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: (Microbial infection) ADP-ribosylthreonine => ECO:0000269|PubMed:32330457
ChainResidueDetails
AVAL66

site_idSWS_FT_FI5
Number of Residues1
DetailsMOD_RES: ADP-ribosylglycine => ECO:0000269|PubMed:28525742
ChainResidueDetails
AGLY76

site_idSWS_FT_FI6
Number of Residues1
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603
ChainResidueDetails
ALYS6

site_idSWS_FT_FI7
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
ChainResidueDetails
AGLY76

site_idSWS_FT_FI8
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144
ChainResidueDetails
ALYS11
ALYS48

site_idSWS_FT_FI9
Number of Residues1
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000305|PubMed:15466860
ChainResidueDetails
ALYS27

site_idSWS_FT_FI10
Number of Residues1
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16543144, ECO:0000269|PubMed:25752573, ECO:0000269|PubMed:25752577, ECO:0000269|PubMed:34239127
ChainResidueDetails
ALYS29

site_idSWS_FT_FI11
Number of Residues1
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:25752577
ChainResidueDetails
ALYS33

site_idSWS_FT_FI12
Number of Residues1
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16543144, ECO:0000269|PubMed:18719106
ChainResidueDetails
ALYS63

224004

PDB entries from 2024-08-21

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