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Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

5OVT

Thiobacillus denitrificans BPH in complex with Epoxomicin

Functional Information from PDB Data

site_id	AC1
Number of Residues	5
Details	binding site for residue PO4 A 301

Chain	Residue
A	THR1
A	THR49
A	SER139
A	GLU176
a	6VO5

site_id	AC2
Number of Residues	5
Details	binding site for residue PO4 C 301

Chain	Residue
c	6VO5
C	THR1
C	THR49
C	SER139
C	GLU176

site_id	AC3
Number of Residues	7
Details	binding site for residue PO4 E 301

Chain	Residue
E	THR1
E	THR49
E	GLY50
E	GLY138
E	SER139
E	GLU176
e	6VO5

site_id	AC4
Number of Residues	6
Details	binding site for residue PO4 G 301

Chain	Residue
G	THR1
G	THR49
G	GLY50
G	SER139
G	GLU176
g	6VO5

site_id	AC5
Number of Residues	6
Details	binding site for residue PO4 b 101

Chain	Residue
B	THR1
B	THR49
B	GLY50
B	GLY138
B	SER139
b	6VO5

site_id	AC6
Number of Residues	6
Details	binding site for residue PO4 d 101

Chain	Residue
D	THR1
D	THR49
D	GLY50
D	SER139
D	GLU176
d	6VO5

site_id	AC7
Number of Residues	7
Details	binding site for residue PO4 f 101

Chain	Residue
F	THR1
F	THR49
F	GLY50
F	GLY138
F	SER139
F	GLU176
f	6VO5

site_id	AC8
Number of Residues	9
Details	binding site for Ligand 6VO a 5 bound to THR A 1

Chain	Residue
A	THR1
A	LEU19
A	LYS21
A	ILE48
A	GLY50
A	ALA52
A	GLU176
A	PO4301
a	THR4

site_id	AC9
Number of Residues	9
Details	binding site for Ligand 6VO a 5 bound to THR A 1

Chain	Residue
A	THR1
A	LEU19
A	LYS21
A	ILE48
A	GLY50
A	ALA52
A	GLU176
A	PO4301
a	THR4

site_id	AD1
Number of Residues	7
Details	binding site for Ligand 6VO b 5 bound to THR B 1

Chain	Residue
B	THR1
B	LEU19
B	ILE48
B	GLY50
B	GLU176
b	THR4
b	PO4101

site_id	AD2
Number of Residues	7
Details	binding site for Ligand 6VO b 5 bound to THR B 1

Chain	Residue
B	THR1
B	LEU19
B	ILE48
B	GLY50
B	GLU176
b	THR4
b	PO4101

site_id	AD3
Number of Residues	7
Details	binding site for Ligand 6VO c 5 bound to THR C 1

Chain	Residue
C	THR1
C	LEU19
C	GLY50
C	ALA52
C	GLU176
C	PO4301
c	THR4

site_id	AD4
Number of Residues	7
Details	binding site for Ligand 6VO c 5 bound to THR C 1

Chain	Residue
C	THR1
C	LEU19
C	GLY50
C	ALA52
C	GLU176
C	PO4301
c	THR4

site_id	AD5
Number of Residues	9
Details	binding site for Ligand 6VO d 5 bound to THR D 1

Chain	Residue
D	THR1
D	LEU19
D	LYS21
D	ILE48
D	GLY50
D	ALA52
D	GLU176
d	THR4
d	PO4101

site_id	AD6
Number of Residues	9
Details	binding site for Ligand 6VO d 5 bound to THR D 1

Chain	Residue
D	LYS21
D	ILE48
D	GLY50
D	ALA52
D	GLU176
d	THR4
d	PO4101
D	THR1
D	LEU19

site_id	AD7
Number of Residues	8
Details	binding site for Ligand 6VO e 5 bound to THR E 1

Chain	Residue
E	THR1
E	LEU19
E	LYS37
E	ILE48
E	GLY50
E	GLU176
E	PO4301
e	THR4

site_id	AD8
Number of Residues	8
Details	binding site for Ligand 6VO e 5 bound to THR E 1

Chain	Residue
E	THR1
E	LEU19
E	LYS37
E	ILE48
E	GLY50
E	GLU176
E	PO4301
e	THR4

site_id	AD9
Number of Residues	8
Details	binding site for Ligand 6VO f 5 bound to THR F 1

Chain	Residue
F	THR1
F	LEU19
F	ILE48
F	GLY50
F	ALA52
F	GLU176
f	THR4
f	PO4101

site_id	AE1
Number of Residues	8
Details	binding site for Ligand 6VO f 5 bound to THR F 1

Chain	Residue
F	THR1
F	LEU19
F	ILE48
F	GLY50
F	ALA52
F	GLU176
f	THR4
f	PO4101

site_id	AE2
Number of Residues	7
Details	binding site for Ligand 6VO g 5 bound to THR G 1

Chain	Residue
G	THR1
G	LEU19
G	GLY50
G	ALA52
G	GLU176
G	PO4301
g	THR4

site_id	AE3
Number of Residues	7
Details	binding site for Ligand 6VO g 5 bound to THR G 1

Chain	Residue
G	THR1
G	LEU19
G	GLY50
G	ALA52
G	GLU176
G	PO4301
g	THR4

site_id	AE4
Number of Residues	9
Details	binding site for Ligand 6VO a 5 bound to THR a 4

Chain	Residue
A	THR1
A	LEU19
A	LYS21
A	ILE48
A	GLY50
A	ALA52
A	GLU176
A	PO4301
a	THR4

site_id	AE5
Number of Residues	7
Details	binding site for Ligand 6VO b 5 bound to THR b 4

Chain	Residue
B	THR1
B	LEU19
B	ILE48
B	GLY50
B	GLU176
b	THR4
b	PO4101

site_id	AE6
Number of Residues	7
Details	binding site for Ligand 6VO c 5 bound to THR c 4

Chain	Residue
C	THR1
C	LEU19
C	GLY50
C	ALA52
C	GLU176
C	PO4301
c	THR4

site_id	AE7
Number of Residues	9
Details	binding site for Ligand 6VO d 5 bound to THR d 4

Chain	Residue
D	THR1
D	LEU19
D	LYS21
D	ILE48
D	GLY50
D	ALA52
D	GLU176
d	THR4
d	PO4101

site_id	AE8
Number of Residues	8
Details	binding site for Ligand 6VO e 5 bound to THR e 4

Chain	Residue
E	THR1
E	LEU19
E	LYS37
E	ILE48
E	GLY50
E	GLU176
E	PO4301
e	THR4

site_id	AE9
Number of Residues	8
Details	binding site for Ligand 6VO f 5 bound to THR f 4

Chain	Residue
F	THR1
F	LEU19
F	ILE48
F	GLY50
F	ALA52
F	GLU176
f	THR4
f	PO4101

site_id	AF1
Number of Residues	7
Details	binding site for Ligand 6VO g 5 bound to THR g 4

Chain	Residue
G	THR1
G	LEU19
G	GLY50
G	ALA52
G	GLU176
G	PO4301
g	THR4

site_id	AF2
Number of Residues	3
Details	binding site for residues ACE a 1 and IML a 2

Chain	Residue
A	TRP22
G	HIS125
a	ILE3

site_id	AF3
Number of Residues	8
Details	binding site for Di-peptide IML a 2 and ILE a 3

Chain	Residue
A	THR20
A	LYS21
A	TRP22
A	SER51
A	ALA52
G	GLN129
a	ACE1
a	THR4

site_id	AF4
Number of Residues	4
Details	binding site for residues ACE b 1 and IML b 2

Chain	Residue
A	ASP110
A	HIS125
B	TRP22
b	ILE3

site_id	AF5
Number of Residues	8
Details	binding site for Di-peptide IML b 2 and ILE b 3

Chain	Residue
A	ALA123
B	THR20
B	LYS21
B	TRP22
B	SER51
B	ALA52
b	ACE1
b	THR4

site_id	AF6
Number of Residues	4
Details	binding site for residues ACE c 1 and IML c 2

Chain	Residue
B	ASP110
B	HIS125
C	TRP22
c	ILE3

site_id	AF7
Number of Residues	7
Details	binding site for Di-peptide IML c 2 and ILE c 3

Chain	Residue
B	HIS125
C	THR20
C	LYS21
C	TRP22
C	ALA52
c	ACE1
c	THR4

site_id	AF8
Number of Residues	3
Details	binding site for residues ACE d 1 and IML d 2

Chain	Residue
C	HIS125
D	TRP22
d	ILE3

site_id	AF9
Number of Residues	9
Details	binding site for Di-peptide IML d 2 and ILE d 3

Chain	Residue
C	GLN129
D	THR20
D	LYS21
D	TRP22
D	GLU27
D	SER51
D	ALA52
d	ACE1
d	THR4

site_id	AG1
Number of Residues	4
Details	binding site for residues ACE e 1 and IML e 2

Chain	Residue
D	ASP110
D	HIS125
E	TRP22
e	ILE3

site_id	AG2
Number of Residues	7
Details	binding site for Di-peptide IML e 2 and ILE e 3

Chain	Residue
E	THR20
E	LYS21
E	TRP22
E	SER51
E	ALA52
e	ACE1
e	THR4

site_id	AG3
Number of Residues	5
Details	binding site for residues ACE f 1 and IML f 2

Chain	Residue
E	ASP110
E	ALA124
E	HIS125
F	TRP22
f	ILE3

site_id	AG4
Number of Residues	9
Details	binding site for Di-peptide IML f 2 and ILE f 3

Chain	Residue
E	HIS125
E	GLN129
F	THR20
F	LYS21
F	TRP22
F	SER51
F	ALA52
f	ACE1
f	THR4

site_id	AG5
Number of Residues	4
Details	binding site for residues ACE g 1 and IML g 2

Chain	Residue
F	ASP110
F	HIS125
G	TRP22
g	ILE3

site_id	AG6
Number of Residues	8
Details	binding site for Di-peptide IML g 2 and ILE g 3

Chain	Residue
G	THR20
G	LYS21
G	TRP22
G	GLU27
G	SER51
G	ALA52
g	ACE1
g	THR4

246031

PDB entries from 2025-12-10

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