5OT8
Structure of the periplasmic binding protein (PBP) NocT-G97S mutant from A. tumefaciens C58 in complex with octopine.
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0015276 | molecular_function | ligand-gated monoatomic ion channel activity |
| A | 0016020 | cellular_component | membrane |
| A | 0030288 | cellular_component | outer membrane-bounded periplasmic space |
| A | 0034220 | biological_process | monoatomic ion transmembrane transport |
| A | 0042597 | cellular_component | periplasmic space |
| A | 0071705 | biological_process | nitrogen compound transport |
| B | 0015276 | molecular_function | ligand-gated monoatomic ion channel activity |
| B | 0016020 | cellular_component | membrane |
| B | 0030288 | cellular_component | outer membrane-bounded periplasmic space |
| B | 0034220 | biological_process | monoatomic ion transmembrane transport |
| B | 0042597 | cellular_component | periplasmic space |
| B | 0071705 | biological_process | nitrogen compound transport |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 14 |
| Details | binding site for residue 6DB A 301 |
| Chain | Residue |
| A | GLU36 |
| A | THR168 |
| A | SER169 |
| A | HIS170 |
| A | SER207 |
| A | EDO304 |
| A | TYR39 |
| A | TRP77 |
| A | ALA94 |
| A | ALA95 |
| A | SER97 |
| A | ARG102 |
| A | MET117 |
| A | GLN165 |
| site_id | AC2 |
| Number of Residues | 1 |
| Details | binding site for residue EDO A 302 |
| Chain | Residue |
| A | PHE72 |
| site_id | AC3 |
| Number of Residues | 3 |
| Details | binding site for residue EDO A 303 |
| Chain | Residue |
| A | ILE98 |
| A | PRO100 |
| A | GLU103 |
| site_id | AC4 |
| Number of Residues | 5 |
| Details | binding site for residue EDO A 304 |
| Chain | Residue |
| A | SER97 |
| A | THR115 |
| A | MET117 |
| A | SER169 |
| A | 6DB301 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | binding site for residue SO4 A 305 |
| Chain | Residue |
| A | PRO138 |
| A | ASN141 |
| A | THR143 |
| A | GLN146 |
| site_id | AC6 |
| Number of Residues | 2 |
| Details | binding site for residue CL A 306 |
| Chain | Residue |
| A | LYS50 |
| A | LEU51 |
| site_id | AC7 |
| Number of Residues | 1 |
| Details | binding site for residue CL A 308 |
| Chain | Residue |
| B | LYS147 |
| site_id | AC8 |
| Number of Residues | 3 |
| Details | binding site for residue CL A 309 |
| Chain | Residue |
| A | TYR186 |
| A | ASP187 |
| A | ASN191 |
| site_id | AC9 |
| Number of Residues | 2 |
| Details | binding site for residue CL A 310 |
| Chain | Residue |
| A | GLN272 |
| A | ASP278 |
| site_id | AD1 |
| Number of Residues | 3 |
| Details | binding site for residue CL A 312 |
| Chain | Residue |
| A | ARG65 |
| B | GLN176 |
| B | MET177 |
| site_id | AD2 |
| Number of Residues | 5 |
| Details | binding site for residue PEG A 313 |
| Chain | Residue |
| A | ARG65 |
| A | ASN67 |
| A | LYS256 |
| A | HOH419 |
| B | GLN176 |
| site_id | AD3 |
| Number of Residues | 2 |
| Details | binding site for residue CL B 301 |
| Chain | Residue |
| B | SER97 |
| B | MET117 |
| site_id | AD4 |
| Number of Residues | 1 |
| Details | binding site for residue CL B 302 |
| Chain | Residue |
| B | ARG229 |
| site_id | AD5 |
| Number of Residues | 14 |
| Details | binding site for residue 6DB B 303 |
| Chain | Residue |
| B | GLU36 |
| B | TYR39 |
| B | ASN43 |
| B | TRP77 |
| B | ALA94 |
| B | ALA95 |
| B | SER97 |
| B | ARG102 |
| B | MET117 |
| B | GLN165 |
| B | THR168 |
| B | SER169 |
| B | HIS170 |
| B | SER207 |
Functional Information from PROSITE/UniProt
| site_id | PS01039 |
| Number of Residues | 14 |
| Details | SBP_BACTERIAL_3 Bacterial extracellular solute-binding proteins, family 3 signature. GFDIDLGNdLCKRM |
| Chain | Residue | Details |
| A | GLY53-MET66 |
