5OKB
High resolution structure of native Gan1D, a putative 6-phospho-beta-galactosidase from Geobacillus stearothermophilus
Replaces: 4ZEHFunctional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004553 | molecular_function | hydrolase activity, hydrolyzing O-glycosyl compounds |
| A | 0005829 | cellular_component | cytosol |
| A | 0005975 | biological_process | carbohydrate metabolic process |
| A | 0008422 | molecular_function | beta-glucosidase activity |
| A | 0016052 | biological_process | carbohydrate catabolic process |
| A | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| A | 0033920 | molecular_function | 6-phospho-beta-galactosidase activity |
| B | 0004553 | molecular_function | hydrolase activity, hydrolyzing O-glycosyl compounds |
| B | 0005829 | cellular_component | cytosol |
| B | 0005975 | biological_process | carbohydrate metabolic process |
| B | 0008422 | molecular_function | beta-glucosidase activity |
| B | 0016052 | biological_process | carbohydrate catabolic process |
| B | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| B | 0033920 | molecular_function | 6-phospho-beta-galactosidase activity |
| C | 0004553 | molecular_function | hydrolase activity, hydrolyzing O-glycosyl compounds |
| C | 0005829 | cellular_component | cytosol |
| C | 0005975 | biological_process | carbohydrate metabolic process |
| C | 0008422 | molecular_function | beta-glucosidase activity |
| C | 0016052 | biological_process | carbohydrate catabolic process |
| C | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| C | 0033920 | molecular_function | 6-phospho-beta-galactosidase activity |
| D | 0004553 | molecular_function | hydrolase activity, hydrolyzing O-glycosyl compounds |
| D | 0005829 | cellular_component | cytosol |
| D | 0005975 | biological_process | carbohydrate metabolic process |
| D | 0008422 | molecular_function | beta-glucosidase activity |
| D | 0016052 | biological_process | carbohydrate catabolic process |
| D | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| D | 0033920 | molecular_function | 6-phospho-beta-galactosidase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 3 |
| Details | binding site for residue IMD A 501 |
| Chain | Residue |
| A | MET262 |
| A | TRP285 |
| A | GLN289 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | binding site for residue IMD A 502 |
| Chain | Residue |
| A | GLY323 |
| A | ASN349 |
| A | GLU383 |
| A | PHE384 |
| site_id | AC3 |
| Number of Residues | 3 |
| Details | binding site for residue GOL A 503 |
| Chain | Residue |
| A | HOH607 |
| A | GLU383 |
| A | PHE384 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | binding site for residue IMD A 504 |
| Chain | Residue |
| A | ILE173 |
| A | TYR301 |
| A | PO4505 |
| A | HOH657 |
| site_id | AC5 |
| Number of Residues | 8 |
| Details | binding site for residue PO4 A 505 |
| Chain | Residue |
| A | GLN23 |
| A | TRP425 |
| A | LEU430 |
| A | TRP433 |
| A | TYR441 |
| A | IMD504 |
| A | HOH610 |
| A | HOH645 |
| site_id | AC6 |
| Number of Residues | 4 |
| Details | binding site for residue IMD B 501 |
| Chain | Residue |
| B | TRP260 |
| B | MET262 |
| B | HOH612 |
| D | GLN371 |
| site_id | AC7 |
| Number of Residues | 5 |
| Details | binding site for residue IMD B 502 |
| Chain | Residue |
| B | PRO343 |
| B | HIS344 |
| B | VAL345 |
| B | ASP346 |
| C | ARG157 |
| site_id | AC8 |
| Number of Residues | 10 |
| Details | binding site for residue PO4 B 503 |
| Chain | Residue |
| B | TRP352 |
| B | SER432 |
| B | ASN435 |
| B | LYS439 |
| B | TYR441 |
| B | HOH634 |
| B | HOH638 |
| B | HOH665 |
| B | HOH899 |
| B | HOH962 |
| site_id | AC9 |
| Number of Residues | 3 |
| Details | binding site for residue IMD C 501 |
| Chain | Residue |
| C | LYS189 |
| C | ASP190 |
| C | HOH1056 |
| site_id | AD1 |
| Number of Residues | 6 |
| Details | binding site for residue IMD C 502 |
| Chain | Residue |
| C | ILE173 |
| C | TYR301 |
| C | GLU378 |
| C | PO4503 |
| C | HOH658 |
| C | HOH705 |
| site_id | AD2 |
| Number of Residues | 10 |
| Details | binding site for residue PO4 C 503 |
| Chain | Residue |
| C | GLN23 |
| C | TRP425 |
| C | LEU430 |
| C | SER432 |
| C | TRP433 |
| C | TYR441 |
| C | IMD502 |
| C | HOH619 |
| C | HOH657 |
| C | HOH665 |
| site_id | AD3 |
| Number of Residues | 3 |
| Details | binding site for residue IMD D 501 |
| Chain | Residue |
| D | LYS189 |
| D | ASP190 |
| D | HOH1007 |
| site_id | AD4 |
| Number of Residues | 3 |
| Details | binding site for residue GOL D 502 |
| Chain | Residue |
| D | SER176 |
| D | ALA226 |
| D | HOH712 |
| site_id | AD5 |
| Number of Residues | 8 |
| Details | binding site for residue PO4 D 503 |
| Chain | Residue |
| D | GLN23 |
| D | TRP425 |
| D | LEU430 |
| D | SER432 |
| D | TRP433 |
| D | TYR441 |
| D | HOH637 |
| D | HOH659 |
Functional Information from PROSITE/UniProt
| site_id | PS00572 |
| Number of Residues | 9 |
| Details | GLYCOSYL_HYDROL_F1_1 Glycosyl hydrolases family 1 active site. ILITENGLG |
| Chain | Residue | Details |
| A | ILE374-GLY382 |
| site_id | PS00653 |
| Number of Residues | 15 |
| Details | GLYCOSYL_HYDROL_F1_2 Glycosyl hydrolases family 1 N-terminal signature. FlWGaAsAAYQvEgA |
| Chain | Residue | Details |
| A | PHE13-ALA27 |
