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5OER

Hen egg-white lysozyme refined against 5000 9 keV diffraction patterns

Functional Information from GO Data
ChainGOidnamespacecontents
A0003796molecular_functionlysozyme activity
A0005515molecular_functionprotein binding
A0005576cellular_componentextracellular region
A0005615cellular_componentextracellular space
A0005737cellular_componentcytoplasm
A0005783cellular_componentendoplasmic reticulum
A0016231molecular_functionbeta-N-acetylglucosaminidase activity
A0016798molecular_functionhydrolase activity, acting on glycosyl bonds
A0016998biological_processcell wall macromolecule catabolic process
A0031640biological_processkilling of cells of another organism
A0042742biological_processdefense response to bacterium
A0042802molecular_functionidentical protein binding
A0050829biological_processdefense response to Gram-negative bacterium
A0050830biological_processdefense response to Gram-positive bacterium
A0051672biological_processobsolete catabolism by organism of cell wall peptidoglycan in other organism
Functional Information from PDB Data
site_idAC1
Number of Residues13
Detailsbinding site for residue DO3 A 201
ChainResidue
ATRP62
AHOH306
AHOH318
AHOH325
AHOH326
ALEU75
AASP101
AASN103
AASP119
AGLN121
ADO3202
AGD203
AHOH303

site_idAC2
Number of Residues9
Detailsbinding site for residue DO3 A 202
ChainResidue
AARG5
AGLY117
ATRP123
ADO3201
AGD204
AHOH303
AHOH306
AHOH318
AHOH326

site_idAC3
Number of Residues2
Detailsbinding site for residue GD A 203
ChainResidue
ADO3201
AHOH306

site_idAC4
Number of Residues2
Detailsbinding site for residue GD A 204
ChainResidue
ADO3202
AHOH318

site_idAC5
Number of Residues5
Detailsbinding site for residue NA A 205
ChainResidue
AILE98
AASP101
AASN103
AGLY104
AALA107

Functional Information from PROSITE/UniProt
site_idPS00128
Number of Residues19
DetailsGLYCOSYL_HYDROL_F22_1 Glycosyl hydrolases family 22 (GH22) domain signature. CnipCsaLlssDItasvnC
ChainResidueDetails
ACYS76-CYS94

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE:
ChainResidueDetails
AGLU35
AASP52

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING:
ChainResidueDetails
AASP101

Catalytic Information from CSA
site_idMCSA1
Number of Residues6
DetailsM-CSA 203
ChainResidueDetails
AGLU35hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AASN46
AASP48
ASER50
AASP52covalently attached, electrostatic stabiliser, nucleofuge, nucleophile, polar/non-polar interaction
AASN59

222926

PDB entries from 2024-07-24

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