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5O4F

Structure of GluK3 ligand-binding domain (S1S2) in complex with the agonist LM-12b at 2.10 A resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0015276molecular_functionligand-gated monoatomic ion channel activity
A0016020cellular_componentmembrane
B0015276molecular_functionligand-gated monoatomic ion channel activity
B0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue GOL B 301
ChainResidue
BLYS60
BTYR61
BGLY62
BALA63
BVAL137
BHOH408
BHOH432

site_idAC2
Number of Residues2
Detailsbinding site for residue GOL B 302
ChainResidue
AHIS93
BHOH431

site_idAC3
Number of Residues6
Detailsbinding site for residue GOL B 303
ChainResidue
BGLU13
BGLU14
BASN172
BTHR192
BGOL304
BHOH450

site_idAC4
Number of Residues8
Detailsbinding site for residue GOL B 304
ChainResidue
BLEU11
BLEU12
BGLU13
BASN171
BASN172
BGLU173
BGOL303
BHOH432

site_idAC5
Number of Residues11
Detailsbinding site for residue 8VE B 305
ChainResidue
BTYR61
BPRO88
BTHR90
BARG95
BGLY140
BALA141
BTHR142
BASN172
BGLU189
BHOH416
BHOH435

site_idAC6
Number of Residues4
Detailsbinding site for residue ZN B 306
ChainResidue
AHIS93
AGLU96
BASP240
BHIS243

site_idAC7
Number of Residues4
Detailsbinding site for residue ZN B 307
ChainResidue
BHIS80
BHIS80
BHOH413
BHOH413

site_idAC8
Number of Residues2
Detailsbinding site for residue ZN B 308
ChainResidue
BGLU42
BLYS241

site_idAC9
Number of Residues2
Detailsbinding site for residue CL B 309
ChainResidue
BARG31
BLEU55

site_idAD1
Number of Residues2
Detailsbinding site for residue CL B 310
ChainResidue
BARG20
BARG24

site_idAD2
Number of Residues6
Detailsbinding site for residue GOL A 301
ChainResidue
AGLU13
AGLU14
AASN172
AGLU173
ATHR192
AHOH408

site_idAD3
Number of Residues11
Detailsbinding site for residue 8VE A 302
ChainResidue
ATYR61
APRO88
ATHR90
AARG95
AGLY140
AALA141
ATHR142
AASN172
AGLU189
AHOH416
AHOH441

site_idAD4
Number of Residues2
Detailsbinding site for residue ZN A 303
ChainResidue
AGLU194
ALYS246

site_idAD5
Number of Residues4
Detailsbinding site for residue ZN A 304
ChainResidue
AHIS80
AZN305
BHIS93
BLYS97

site_idAD6
Number of Residues4
Detailsbinding site for residue ZN A 305
ChainResidue
AHIS80
AZN304
AACT308
BHIS93

site_idAD7
Number of Residues2
Detailsbinding site for residue CL A 306
ChainResidue
AARG31
ALEU55

site_idAD8
Number of Residues1
Detailsbinding site for residue CL A 307
ChainResidue
ATYR61

site_idAD9
Number of Residues2
Detailsbinding site for residue ACT A 308
ChainResidue
AARG4
AZN305

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues12
DetailsBINDING: BINDING => ECO:0000269|PubMed:21907808, ECO:0007744|PDB:3S9E
ChainResidueDetails
BPRO88
AALA141
ATHR142
AGLU189
BTHR90
BARG95
BALA141
BTHR142
BGLU189
APRO88
ATHR90
AARG95

site_idSWS_FT_FI2
Number of Residues4
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
BASN3
BASN202
AASN3
AASN202

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PDB entries from 2025-06-18

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