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5O05

GII.10 Vietnam 026 norovirus protruding domain in complex with Nanobody Nano-42

Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue EDO C 201
ChainResidue
BLEU420
CGLN1
CSER27
CTYR109

site_idAC2
Number of Residues7
Detailsbinding site for residue EDO D 201
ChainResidue
DGLU46
DALA91
DARG38
DGLN39
DTHR40
DASN43
DGLN44

site_idAC3
Number of Residues5
Detailsbinding site for residue EDO D 202
ChainResidue
AARG484
AASP526
DARG30
DTHR31
DSER53

site_idAC4
Number of Residues5
Detailsbinding site for residue EDO A 601
ChainResidue
ALEU272
AGLN273
AGLY274
ATHR276
AHOH773

site_idAC5
Number of Residues7
Detailsbinding site for residue EDO A 602
ChainResidue
AASN309
ALEU310
AASN311
ALEU325
AHOH746
AHOH790
AHOH809

site_idAC6
Number of Residues8
Detailsbinding site for residue EDO A 603
ChainResidue
APRO243
APRO280
ATHR281
AHOH780
BPRO243
BPRO280
BTHR281
BHOH800

site_idAC7
Number of Residues7
Detailsbinding site for residue EDO A 604
ChainResidue
APRO230
AGLU464
AHIS468
AHOH737
BGLN471
BEDO605
BEDO613

site_idAC8
Number of Residues6
Detailsbinding site for residue EDO A 605
ChainResidue
AGLY450
AGLY451
AHOH702
BASN355
BARG356
BHOH743

site_idAC9
Number of Residues3
Detailsbinding site for residue EDO A 606
ChainResidue
AARG341
BPHE445
BEDO620

site_idAD1
Number of Residues8
Detailsbinding site for residue EDO A 607
ChainResidue
ALEU279
ATHR281
AGLY282
ALYS393
AHOH726
AHOH734
AHOH735
BPRO245

site_idAD2
Number of Residues5
Detailsbinding site for residue EDO A 608
ChainResidue
AARG299
ASER379
ATHR380
ATRP381
AHOH721

site_idAD3
Number of Residues4
Detailsbinding site for residue EDO A 609
ChainResidue
AGLU359
ATRP381
ALYS449
BHOH719

site_idAD4
Number of Residues2
Detailsbinding site for residue EDO A 610
ChainResidue
ALEU352
APRO514

site_idAD5
Number of Residues5
Detailsbinding site for residue EDO A 611
ChainResidue
AVAL259
APHE441
AHOH708
AHOH715
AHOH743

site_idAD6
Number of Residues5
Detailsbinding site for residue EDO A 612
ChainResidue
AARG509
ASER511
AVAL515
AVAL516
AMET538

site_idAD7
Number of Residues8
Detailsbinding site for residue EDO A 613
ChainResidue
ALEU234
AASP247
AVAL248
ALEU249
AVAL515
AALA517
ATHR519
AHOH709

site_idAD8
Number of Residues3
Detailsbinding site for residue EDO A 614
ChainResidue
ALYS225
AGLN471
AGLU472

site_idAD9
Number of Residues4
Detailsbinding site for residue EDO A 615
ChainResidue
AILE258
AGLN260
ATRP411
ALEU413

site_idAE1
Number of Residues6
Detailsbinding site for residue EDO A 616
ChainResidue
AHOH763
BGLY450
BGLY451
AALA354
AASN355
AHOH733

site_idAE2
Number of Residues5
Detailsbinding site for residue EDO B 601
ChainResidue
BASN309
BLEU310
BASN311
BHOH705
BHOH770

site_idAE3
Number of Residues8
Detailsbinding site for residue EDO B 602
ChainResidue
APRO245
BTHR281
BGLY282
BALA285
BLEU310
BLYS393
BHOH715
BHOH809

site_idAE4
Number of Residues5
Detailsbinding site for residue EDO B 603
ChainResidue
BLEU272
BGLN273
BGLY274
BTHR276
BVAL321

site_idAE5
Number of Residues3
Detailsbinding site for residue EDO B 604
ChainResidue
ALEU278
BGLU236
BHOH732

site_idAE6
Number of Residues7
Detailsbinding site for residue EDO B 605
ChainResidue
AGLN471
AEDO604
AHOH737
BLEU232
BGLU464
BHIS468
BEDO613

site_idAE7
Number of Residues3
Detailsbinding site for residue EDO B 606
ChainResidue
BARG299
BSER379
BTHR380

site_idAE8
Number of Residues4
Detailsbinding site for residue EDO B 607
ChainResidue
APHE445
APRO447
BARG341
BEDO614

site_idAE9
Number of Residues1
Detailsbinding site for residue EDO B 608
ChainResidue
BASN351

site_idAF1
Number of Residues3
Detailsbinding site for residue EDO B 609
ChainResidue
BGLU359
BTRP381
BLYS449

site_idAF2
Number of Residues6
Detailsbinding site for residue EDO B 610
ChainResidue
ALEU279
AHOH726
BPRO245
BILE246
BHOH729
BHOH790

site_idAF3
Number of Residues4
Detailsbinding site for residue EDO B 611
ChainResidue
BARG509
BSER511
BVAL516
BHOH769

site_idAF4
Number of Residues6
Detailsbinding site for residue EDO B 612
ChainResidue
BARG484
BASP526
CARG30
CTHR31
CSER53
CVAL54

site_idAF5
Number of Residues5
Detailsbinding site for residue EDO B 613
ChainResidue
AEDO604
BHIS468
BGLN471
BGLU472
BEDO605

site_idAF6
Number of Residues4
Detailsbinding site for residue EDO B 614
ChainResidue
BARG287
BLYS393
BEDO607
BHOH738

site_idAF7
Number of Residues3
Detailsbinding site for residue EDO B 615
ChainResidue
AILE231
BTYR470
BHOH773

site_idAF8
Number of Residues4
Detailsbinding site for residue EDO B 616
ChainResidue
BASP296
BGLU297
BHIS298
BGLY300

site_idAF9
Number of Residues5
Detailsbinding site for residue EDO B 617
ChainResidue
BSER417
BHOH741
BHOH746
BHOH757
CASP108

site_idAG1
Number of Residues2
Detailsbinding site for residue EDO B 618
ChainResidue
BVAL515
BALA517

site_idAG2
Number of Residues2
Detailsbinding site for residue EDO B 619
ChainResidue
BTHR493
BGLU496

site_idAG3
Number of Residues4
Detailsbinding site for residue EDO B 620
ChainResidue
AEDO606
BPRO245
BASP247
BHOH712

218853

PDB entries from 2024-04-24

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