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5NZD

The structure of the thermobifida fusca guanidine III riboswitch in space group P212121.

Functional Information from PDB Data
site_idAC1
Number of Residues3
Detailsbinding site for residue MG A 101
ChainResidue
AG12
AC13
AHOH205

site_idAC2
Number of Residues2
Detailsbinding site for residue MG A 102
ChainResidue
AG40
AHOH209

site_idAC3
Number of Residues1
Detailsbinding site for residue MG A 104
ChainResidue
AHOH208

site_idAC4
Number of Residues4
Detailsbinding site for residue MG A 105
ChainResidue
AHOH203
AA30
AC31
AA32

site_idAC5
Number of Residues1
Detailsbinding site for residue NA A 107
ChainResidue
AA27

site_idAC6
Number of Residues5
Detailsbinding site for residue ACT A 108
ChainResidue
AC6
AG7
AA8
AC16
AG17

site_idAC7
Number of Residues6
Detailsbinding site for residue MG B 101
ChainResidue
BA30
BC31
BHOH206
BHOH207
BHOH210
BHOH211

site_idAC8
Number of Residues1
Detailsbinding site for residue MG B 102
ChainResidue
BHOH208

site_idAC9
Number of Residues2
Detailsbinding site for residue MG B 104
ChainResidue
BG23
BHOH215

site_idAD1
Number of Residues4
Detailsbinding site for residue ACT B 105
ChainResidue
BC6
BG7
BA8
BG17

site_idAD2
Number of Residues8
Detailsbinding site for Di-nucleotide C B 1 and CBV B 2
ChainResidue
AC1
AG24
AU25
BG3
BG23
BG24
BA27
BHOH201

site_idAD3
Number of Residues8
Detailsbinding site for Di-nucleotide CBV B 2 and G B 3
ChainResidue
BC1
BG4
BC22
BG23
BG24
BA27
BG28
BHOH201

site_idAD4
Number of Residues10
Detailsbinding site for Di-nucleotide G B 38 and CBV B 39
ChainResidue
AC26
BG10
BU11
BG14
BC15
BC16
BA30
BC31
BG37
BG40

site_idAD5
Number of Residues11
Detailsbinding site for Di-nucleotide CBV B 39 and G B 40
ChainResidue
AC26
BG10
BU11
BG12
BC13
BG14
BC15
BA30
BC31
BG38
BC41

250059

PDB entries from 2026-03-04

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