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5NTW

Structural states of RORgt: X-ray elucidation of molecular mechanisms and binding interactions for natural and synthetic compounds

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0004879molecular_functionnuclear receptor activity
A0005634cellular_componentnucleus
A0006355biological_processregulation of DNA-templated transcription
B0003677molecular_functionDNA binding
B0004879molecular_functionnuclear receptor activity
B0005634cellular_componentnucleus
B0006355biological_processregulation of DNA-templated transcription
C0003677molecular_functionDNA binding
C0004879molecular_functionnuclear receptor activity
C0005634cellular_componentnucleus
C0006355biological_processregulation of DNA-templated transcription
D0003677molecular_functionDNA binding
D0004879molecular_functionnuclear receptor activity
D0005634cellular_componentnucleus
D0006355biological_processregulation of DNA-templated transcription
Functional Information from PDB Data
site_idAC1
Number of Residues19
Detailsbinding site for residue 98N A 601
ChainResidue
ACYS285
AALA368
APHE377
ALEU391
ACYS393
ALEU396
AILE400
AHIS479
AARG482
AHOH770
AHOH815
AGLN286
ALEU287
ATRP317
ACYS320
AHIS323
AARG364
AMET365
AARG367

site_idAC2
Number of Residues17
Detailsbinding site for residue 98N B 601
ChainResidue
BCYS285
BGLN286
BLEU287
BHIS323
BARG364
BMET365
BARG367
BALA368
BPHE377
BPHE378
BPHE388
BLEU391
BCYS393
BLEU396
BHIS479
BHOH770
BHOH795

site_idAC3
Number of Residues17
Detailsbinding site for residue 98N C 601
ChainResidue
CCYS285
CGLN286
CLEU287
CTRP317
CHIS323
CARG364
CMET365
CARG367
CALA368
CPHE377
CLEU391
CCYS393
CLEU396
CHIS479
CARG482
CHOH763
CHOH849

site_idAC4
Number of Residues18
Detailsbinding site for residue 98N D 601
ChainResidue
DCYS285
DGLN286
DLEU287
DTRP317
DCYS320
DHIS323
DARG364
DMET365
DARG367
DALA368
DPHE377
DLEU391
DCYS393
DLEU396
DHIS479
DARG482
DHOH765
DHOH808

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues956
DetailsDomain: {"description":"NR LBD","evidences":[{"source":"PROSITE-ProRule","id":"PRU01189","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues20
DetailsMotif: {"description":"AF-2"}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues16
DetailsMotif: {"description":"LXXLL motif 6"}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"PubMed","id":"28112733","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

247536

PDB entries from 2026-01-14

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