5NTN
Structural states of RORgt: X-ray elucidation of molecular mechanisms and binding interactions for natural and synthetic compounds
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003677 | molecular_function | DNA binding |
A | 0004879 | molecular_function | nuclear receptor activity |
A | 0005634 | cellular_component | nucleus |
A | 0006355 | biological_process | regulation of DNA-templated transcription |
B | 0003677 | molecular_function | DNA binding |
B | 0004879 | molecular_function | nuclear receptor activity |
B | 0005634 | cellular_component | nucleus |
B | 0006355 | biological_process | regulation of DNA-templated transcription |
C | 0003677 | molecular_function | DNA binding |
C | 0004879 | molecular_function | nuclear receptor activity |
C | 0005634 | cellular_component | nucleus |
C | 0006355 | biological_process | regulation of DNA-templated transcription |
D | 0003677 | molecular_function | DNA binding |
D | 0004879 | molecular_function | nuclear receptor activity |
D | 0005634 | cellular_component | nucleus |
D | 0006355 | biological_process | regulation of DNA-templated transcription |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 9 |
Details | binding site for residue 98H A 601 |
Chain | Residue |
A | GLN286 |
A | TRP317 |
A | HIS323 |
A | LEU324 |
A | PHE377 |
A | HIS479 |
A | TYR502 |
A | HOH749 |
A | HOH798 |
site_id | AC2 |
Number of Residues | 9 |
Details | binding site for residue 98H B 601 |
Chain | Residue |
B | GLN286 |
B | HIS323 |
B | LEU324 |
B | PHE377 |
B | PHE378 |
B | HIS479 |
B | TYR502 |
B | HOH754 |
B | HOH769 |
site_id | AC3 |
Number of Residues | 8 |
Details | binding site for residue 98H C 601 |
Chain | Residue |
C | GLN286 |
C | HIS323 |
C | LEU324 |
C | PHE377 |
C | HIS479 |
C | TYR502 |
C | HOH751 |
C | HOH764 |
site_id | AC4 |
Number of Residues | 10 |
Details | binding site for residue 98H D 601 |
Chain | Residue |
D | GLN286 |
D | TRP317 |
D | HIS323 |
D | LEU324 |
D | PHE377 |
D | PHE378 |
D | HIS479 |
D | TYR502 |
D | HOH725 |
D | HOH759 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 8 |
Details | CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733 |
Chain | Residue | Details |
P | LYS508 | |
Q | LYS508 | |
R | LYS508 | |
S | LYS508 |