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5NDI

The structure of the E.coli guanidine II riboswitch P1 stem-loop

Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue GAI A 101
ChainResidue
AG8
AA9
AC10
AG11

site_idAC2
Number of Residues4
Detailsbinding site for residue GAI B 101
ChainResidue
BG8
BA9
BC10
BG11

site_idAC3
Number of Residues1
Detailsbinding site for residue NA B 102
ChainResidue
BG8

site_idAC4
Number of Residues4
Detailsbinding site for residue GAI C 101
ChainResidue
CG8
CA9
CC10
CG11

site_idAC5
Number of Residues4
Detailsbinding site for residue GAI D 101
ChainResidue
DG8
DA9
DC10
DG11

site_idAC6
Number of Residues9
Detailsbinding site for Di-nucleotide G B 16 and CBV B 17
ChainResidue
AG7
AG8
BG4
BC5
BA6
BU15
BA18
BHOH202
BHOH203

site_idAC7
Number of Residues7
Detailsbinding site for Di-nucleotide CBV B 17 and A B 18
ChainResidue
AG8
BU3
BG4
BG16
BA19
BHOH202
BHOH203

site_idAC8
Number of Residues7
Detailsbinding site for Di-nucleotide G C 16 and CBV C 17
ChainResidue
CG4
CC5
CA6
CU15
CA18
DG7
DG8

site_idAC9
Number of Residues6
Detailsbinding site for Di-nucleotide CBV C 17 and A C 18
ChainResidue
CU3
CG4
CC5
CG16
CA19
DG8

site_idAD1
Number of Residues6
Detailsbinding site for Di-nucleotide G D 16 and CBV D 17
ChainResidue
CG8
DG4
DC5
DA6
DU15
DA18

site_idAD2
Number of Residues7
Detailsbinding site for Di-nucleotide CBV D 17 and A D 18
ChainResidue
BU2
CG8
DU3
DG4
DC5
DG16
DA19

222415

PDB entries from 2024-07-10

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