5NAY

Crystal structures of homooligomers of collagen type IV. alpha1NC1

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005201	molecular_function	extracellular matrix structural constituent
A	0005581	cellular_component	collagen trimer
B	0005201	molecular_function	extracellular matrix structural constituent
B	0005581	cellular_component	collagen trimer
C	0005201	molecular_function	extracellular matrix structural constituent
C	0005581	cellular_component	collagen trimer
D	0005201	molecular_function	extracellular matrix structural constituent
D	0005581	cellular_component	collagen trimer
E	0005201	molecular_function	extracellular matrix structural constituent
E	0005581	cellular_component	collagen trimer
F	0005201	molecular_function	extracellular matrix structural constituent
F	0005581	cellular_component	collagen trimer

Functional Information from PDB Data

site_id	AC1
Number of Residues	7
Details	binding site for residue CL A 301

Chain	Residue
A	ALA74
A	ARG76
A	ASN77
A	ASP78
A	GLY178
A	HOH434
D	ARG179

---

site_id	AC2
Number of Residues	3
Details	binding site for residue CL A 302

Chain	Residue
F	ALA186
A	TYR189
C	ASN66

---

site_id	AC3
Number of Residues	3
Details	binding site for residue CL A 303

Chain	Residue
A	ALA186
D	ASN66
F	TYR189

---

site_id	AC4
Number of Residues	3
Details	binding site for residue CL A 304

Chain	Residue
A	ASN66
B	TYR189
D	ALA186

---

site_id	AC5
Number of Residues	4
Details	binding site for residue SO4 A 305

Chain	Residue
A	ALA212
A	GLY213
A	LEU215
A	ARG216

---

site_id	AC6
Number of Residues	6
Details	binding site for residue CL B 301

Chain	Residue
B	ALA74
B	SER75
B	ARG76
B	ASP78
B	GLY178
E	ARG179

---

site_id	AC7
Number of Residues	3
Details	binding site for residue CL B 302

Chain	Residue
B	ASN66
C	TYR189
E	ALA186

---

site_id	AC8
Number of Residues	3
Details	binding site for residue CL B 303

Chain	Residue
B	ALA186
D	TYR189
E	ASN66

---

site_id	AC9
Number of Residues	6
Details	binding site for residue SO4 B 304

Chain	Residue
B	ALA212
B	GLY213
B	GLU214
B	LEU215
B	ARG216
B	HOH430

---

site_id	AD1
Number of Residues	3
Details	binding site for residue CL C 301

Chain	Residue
C	ALA186
E	TYR189
F	ASN66

---

site_id	AD2
Number of Residues	5
Details	binding site for residue CL C 302

Chain	Residue
C	ALA74
C	ARG76
C	ASP78
C	GLY178
F	ARG179

---

site_id	AD3
Number of Residues	6
Details	binding site for residue SO4 C 303

Chain	Residue
C	ALA212
C	GLY213
C	GLU214
C	LEU215
C	ARG216
C	HOH476

---

site_id	AD4
Number of Residues	5
Details	binding site for residue CL D 301

Chain	Residue
A	ARG179
D	ALA74
D	ARG76
D	ASP78
D	GLY178

---

site_id	AD5
Number of Residues	8
Details	binding site for residue SO4 D 302

Chain	Residue
A	SER135
A	SER136
A	ARG228
A	HOH516
D	TYR31
D	ARG102
F	ARG198
F	MET201

---

site_id	AD6
Number of Residues	6
Details	binding site for residue SO4 D 303

Chain	Residue
D	ALA212
D	GLY213
D	GLU214
D	LEU215
D	ARG216
D	HOH419

---

site_id	AD7
Number of Residues	5
Details	binding site for residue CL E 301

Chain	Residue
B	ARG179
E	ALA74
E	ARG76
E	ASP78
E	GLY178

---

site_id	AD8
Number of Residues	6
Details	binding site for residue SO4 E 302

Chain	Residue
E	ALA212
E	GLY213
E	GLU214
E	LEU215
E	ARG216
E	HOH418

---

site_id	AD9
Number of Residues	10
Details	binding site for residue SO4 E 303

Chain	Residue
B	SER135
B	SER136
B	ARG228
D	ARG198
D	MET201
E	TYR31
E	ARG102
E	HOH447
E	HOH495
E	HOH499

---

site_id	AE1
Number of Residues	6
Details	binding site for residue CL F 301

Chain	Residue
C	ARG179
F	ALA74
F	ARG76
F	ASP78
F	GLY178
F	HOH416

---

site_id	AE2
Number of Residues	7
Details	binding site for residue SO4 F 302

Chain	Residue
F	GLY213
F	GLU214
F	LEU215
F	ARG216
F	HOH462
F	HOH467
F	ALA212

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	1344
Details	Domain: {"description":"Collagen IV NC1","evidences":[{"source":"PROSITE-ProRule","id":"PRU00736","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	6
Details	Cross-link: {"description":"S-Lysyl-methionine sulfilimine (Met-Lys) (interchain with K-1651)","evidences":[{"source":"PubMed","id":"12011424","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	12
Details	Cross-link: {"description":"S-Lysyl-methionine sulfilimine (Lys-Met) (interchain with M-1533)","evidences":[{"source":"PubMed","id":"12011424","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

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