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5NAY

Crystal structures of homooligomers of collagen type IV. alpha1NC1

Functional Information from GO Data
ChainGOidnamespacecontents
A0005201molecular_functionextracellular matrix structural constituent
A0005581cellular_componentcollagen trimer
B0005201molecular_functionextracellular matrix structural constituent
B0005581cellular_componentcollagen trimer
C0005201molecular_functionextracellular matrix structural constituent
C0005581cellular_componentcollagen trimer
D0005201molecular_functionextracellular matrix structural constituent
D0005581cellular_componentcollagen trimer
E0005201molecular_functionextracellular matrix structural constituent
E0005581cellular_componentcollagen trimer
F0005201molecular_functionextracellular matrix structural constituent
F0005581cellular_componentcollagen trimer
Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue CL A 301
ChainResidue
AALA74
AARG76
AASN77
AASP78
AGLY178
AHOH434
DARG179

site_idAC2
Number of Residues3
Detailsbinding site for residue CL A 302
ChainResidue
FALA186
ATYR189
CASN66

site_idAC3
Number of Residues3
Detailsbinding site for residue CL A 303
ChainResidue
AALA186
DASN66
FTYR189

site_idAC4
Number of Residues3
Detailsbinding site for residue CL A 304
ChainResidue
AASN66
BTYR189
DALA186

site_idAC5
Number of Residues4
Detailsbinding site for residue SO4 A 305
ChainResidue
AALA212
AGLY213
ALEU215
AARG216

site_idAC6
Number of Residues6
Detailsbinding site for residue CL B 301
ChainResidue
BALA74
BSER75
BARG76
BASP78
BGLY178
EARG179

site_idAC7
Number of Residues3
Detailsbinding site for residue CL B 302
ChainResidue
BASN66
CTYR189
EALA186

site_idAC8
Number of Residues3
Detailsbinding site for residue CL B 303
ChainResidue
BALA186
DTYR189
EASN66

site_idAC9
Number of Residues6
Detailsbinding site for residue SO4 B 304
ChainResidue
BALA212
BGLY213
BGLU214
BLEU215
BARG216
BHOH430

site_idAD1
Number of Residues3
Detailsbinding site for residue CL C 301
ChainResidue
CALA186
ETYR189
FASN66

site_idAD2
Number of Residues5
Detailsbinding site for residue CL C 302
ChainResidue
CALA74
CARG76
CASP78
CGLY178
FARG179

site_idAD3
Number of Residues6
Detailsbinding site for residue SO4 C 303
ChainResidue
CALA212
CGLY213
CGLU214
CLEU215
CARG216
CHOH476

site_idAD4
Number of Residues5
Detailsbinding site for residue CL D 301
ChainResidue
AARG179
DALA74
DARG76
DASP78
DGLY178

site_idAD5
Number of Residues8
Detailsbinding site for residue SO4 D 302
ChainResidue
ASER135
ASER136
AARG228
AHOH516
DTYR31
DARG102
FARG198
FMET201

site_idAD6
Number of Residues6
Detailsbinding site for residue SO4 D 303
ChainResidue
DALA212
DGLY213
DGLU214
DLEU215
DARG216
DHOH419

site_idAD7
Number of Residues5
Detailsbinding site for residue CL E 301
ChainResidue
BARG179
EALA74
EARG76
EASP78
EGLY178

site_idAD8
Number of Residues6
Detailsbinding site for residue SO4 E 302
ChainResidue
EALA212
EGLY213
EGLU214
ELEU215
EARG216
EHOH418

site_idAD9
Number of Residues10
Detailsbinding site for residue SO4 E 303
ChainResidue
BSER135
BSER136
BARG228
DARG198
DMET201
ETYR31
EARG102
EHOH447
EHOH495
EHOH499

site_idAE1
Number of Residues6
Detailsbinding site for residue CL F 301
ChainResidue
CARG179
FALA74
FARG76
FASP78
FGLY178
FHOH416

site_idAE2
Number of Residues7
Detailsbinding site for residue SO4 F 302
ChainResidue
FGLY213
FGLU214
FLEU215
FARG216
FHOH462
FHOH467
FALA212

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsCROSSLNK: S-Lysyl-methionine sulfilimine (Met-Lys) (interchain with K-1651) => ECO:0000269|PubMed:12011424
ChainResidueDetails
AMET93
BMET93
CMET93
DMET93
EMET93
FMET93

site_idSWS_FT_FI2
Number of Residues12
DetailsCROSSLNK: S-Lysyl-methionine sulfilimine (Lys-Met) (interchain with M-1533) => ECO:0000269|PubMed:12011424
ChainResidueDetails
ELYS211
FLYS211
ALYS211
BLYS211
CLYS211
DLYS211

218853

PDB entries from 2024-04-24

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