Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5NAY

Crystal structures of homooligomers of collagen type IV. alpha1NC1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-2
Synchrotron siteESRF
BeamlineID23-2
Temperature [K]100
Detector technologyCCD
Collection date2010-05-14
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.87
Spacegroup nameP 21 21 21
Unit cell lengths94.851, 127.045, 130.543
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution57.120 - 1.800
R-factor0.1767
Rwork0.175
R-free0.19940
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1t60
RMSD bond length0.009
RMSD bond angle1.273
Data reduction softwareXDS
Data scaling softwareSCALA (3.3.20)
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]91.0465.6901.900
High resolution limit [Å]1.8004.0201.800
Rmerge0.0370.388
Rmeas0.0900.0440.463
Rpim0.0480.0230.248
Total number of observations479345
Number of reflections142960
<I/σ(I)>10.714.91.9
Completeness [%]98.294.799
Redundancy3.43.53.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2941.4 M lithium sulfate and 0.1 M Mes pH 6.5

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon