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5N27

X-ray structure of human heavy chain ferritin (apo form)

Functional Information from GO Data
ChainGOidnamespacecontents
A0004322molecular_functionferroxidase activity
A0005506molecular_functioniron ion binding
A0005515molecular_functionprotein binding
A0005576cellular_componentextracellular region
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0005764cellular_componentlysosome
A0005776cellular_componentautophagosome
A0005829cellular_componentcytosol
A0006826biological_processiron ion transport
A0006879biological_processintracellular iron ion homeostasis
A0006880biological_processintracellular sequestering of iron ion
A0006955biological_processimmune response
A0008198molecular_functionferrous iron binding
A0008199molecular_functionferric iron binding
A0008285biological_processnegative regulation of cell population proliferation
A0016020cellular_componentmembrane
A0016491molecular_functionoxidoreductase activity
A0031410cellular_componentcytoplasmic vesicle
A0042802molecular_functionidentical protein binding
A0044754cellular_componentautolysosome
A0046872molecular_functionmetal ion binding
A0048147biological_processnegative regulation of fibroblast proliferation
A0070062cellular_componentextracellular exosome
A0070288cellular_componentferritin complex
A0110076biological_processnegative regulation of ferroptosis
A0140315molecular_functioniron ion sequestering activity
A1904724cellular_componenttertiary granule lumen
A1904813cellular_componentficolin-1-rich granule lumen
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue CL A 201
ChainResidue
AHIS173
AHIS173
AHIS173
AHIS173

site_idAC2
Number of Residues4
Detailsbinding site for residue CL A 202
ChainResidue
AARG9
AASN11
ATYR12
AHOH530

site_idAC3
Number of Residues3
Detailsbinding site for residue CL A 203
ChainResidue
AASN139
AHOH500
AGLN75

site_idAC4
Number of Residues2
Detailsbinding site for residue CL A 204
ChainResidue
AGLN14
AHOH502

site_idAC5
Number of Residues4
Detailsbinding site for residue CL A 205
ChainResidue
AHIS173
AHIS173
AHIS173
AHIS173

site_idAC6
Number of Residues4
Detailsbinding site for residue CL A 206
ChainResidue
AGLN83
AASP84
ALYS86
AHOH553

site_idAC7
Number of Residues6
Detailsbinding site for residue MG A 207
ChainResidue
AHOH354
AHOH354
AHOH354
AHOH529
AHOH529
AHOH529

site_idAC8
Number of Residues8
Detailsbinding site for residue MG A 208
ChainResidue
AHOH312
AHOH312
AHOH322
AHOH322
AHOH553
AHOH553
AHOH617
AHOH617

site_idAC9
Number of Residues6
Detailsbinding site for residue MG A 209
ChainResidue
AHOH351
AHOH387
AHOH401
AHOH467
AHOH574
AHOH610

site_idAD1
Number of Residues2
Detailsbinding site for residue MG A 210
ChainResidue
ACYS102
AHOH571

site_idAD2
Number of Residues6
Detailsbinding site for residue MG A 211
ChainResidue
AASP42
ALYS146
AHOH386
AHOH403
AHOH415
AHOH579

site_idAD3
Number of Residues6
Detailsbinding site for residue MG A 212
ChainResidue
AGLN58
AGLU61
AHOH352
AHOH361
AHOH413
AHOH577

site_idAD4
Number of Residues6
Detailsbinding site for residue MG A 213
ChainResidue
AGLU27
AGLU62
AHIS65
AHOH306
AHOH330
AHOH339

site_idAD5
Number of Residues6
Detailsbinding site for residue MG A 214
ChainResidue
AHOH319
AHOH389
AHOH544
AHOH564
AHOH618
AHOH625

Functional Information from PROSITE/UniProt
site_idPS00204
Number of Residues21
DetailsFERRITIN_2 Ferritin iron-binding regions signature 2. DphLCDFIEthYLneqvkaIK
ChainResidueDetails
AASP126-LYS146

site_idPS00540
Number of Residues19
DetailsFERRITIN_1 Ferritin iron-binding regions signature 1. EeREhaEKLMklQNqRgGR
ChainResidueDetails
AGLU61-ARG79

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:1992356, ECO:0007744|PDB:1FHA
ChainResidueDetails
AGLU27
AHIS65

site_idSWS_FT_FI2
Number of Residues3
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00085
ChainResidueDetails
AGLU62
AGLU107
AGLN141

site_idSWS_FT_FI3
Number of Residues1
DetailsSITE: Essential for association with cargo receptor NCOA4 => ECO:0000269|PubMed:26436293
ChainResidueDetails
AARG22

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: N-acetylthreonine; in Ferritin heavy chain, N-terminally processed => ECO:0007744|PubMed:22814378
ChainResidueDetails
ATHR1

site_idSWS_FT_FI5
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:17081983, ECO:0007744|PubMed:18318008, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:24275569
ChainResidueDetails
ASER178

site_idSWS_FT_FI6
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:18318008
ChainResidueDetails
ASER182

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PDB entries from 2024-10-09

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