5N27
X-ray structure of human heavy chain ferritin (apo form)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-09-15 |
Detector | RIGAKU SATURN 944 |
Wavelength(s) | 1.5418 |
Spacegroup name | F 4 3 2 |
Unit cell lengths | 182.955, 182.955, 182.955 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 105.630 - 1.740 |
R-factor | 0.14823 |
Rwork | 0.146 |
R-free | 0.19146 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4y08 |
RMSD bond length | 0.020 |
RMSD bond angle | 1.749 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 105.630 | 1.770 |
High resolution limit [Å] | 1.740 | 1.740 |
Rmerge | 0.114 | 0.733 |
Rpim | 0.032 | 0.404 |
Number of reflections | 27459 | |
<I/σ(I)> | 18 | 1.8 |
Completeness [%] | 99.9 | 98.4 |
Redundancy | 12.2 | 3.8 |
CC(1/2) | 0.627 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 2.0 M MgCl2, 0.1 M bicine pH 9.0 |