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5MVZ

Fab 4AB007 bound to Interleukin-1-beta

Functional Information from GO Data
ChainGOidnamespacecontents
U0005125molecular_functioncytokine activity
U0005615cellular_componentextracellular space
U0006954biological_processinflammatory response
U0006955biological_processimmune response
V0005125molecular_functioncytokine activity
V0005615cellular_componentextracellular space
V0006954biological_processinflammatory response
V0006955biological_processimmune response
Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue GOL H 301
ChainResidue
HGLY167
HHIS169
HTHR188
HHOH426
LASN137
LASN138
LASP167

site_idAC2
Number of Residues7
Detailsbinding site for residue GOL L 301
ChainResidue
LGLU165
LGLN166
LHOH405
LHOH435
LHOH523
LLYS103
LILE106

site_idAC3
Number of Residues6
Detailsbinding site for residue GOL L 302
ChainResidue
BLYS169
BSER171
BGOL303
LPRO15
LPRO80
LHOH418

site_idAC4
Number of Residues6
Detailsbinding site for residue GOL L 303
ChainResidue
BSER76
BHOH418
LARG108
LASP170
LHOH445
LHOH452

site_idAC5
Number of Residues6
Detailsbinding site for residue GOL A 301
ChainResidue
ASER7
AALA9
AGLN110
AGLY111
ATHR112
AMET113

site_idAC6
Number of Residues11
Detailsbinding site for residue GOL B 301
ChainResidue
APHE171
APRO172
ASER182
ALEU183
ASER184
BGLN160
BSER162
BSER176
BSER177
BTHR178
BHOH413

site_idAC7
Number of Residues7
Detailsbinding site for residue GOL B 302
ChainResidue
BLYS103
BILE106
BGLU165
BGLN166
BHOH409
BHOH450
BHOH510

site_idAC8
Number of Residues9
Detailsbinding site for residue GOL B 303
ChainResidue
BPRO15
BGLY16
BLEU78
BHOH429
LPRO15
LLYS169
LASP170
LSER171
LGOL302

site_idAC9
Number of Residues25
Detailsbinding site for Di-peptide LYS V 55 and SER A 133
ChainResidue
ATYR52
APRO53
AGLY54
ASER56
AASP57
ASER132
ASER132
ALYS134
ALYS134
ASER135
ASER135
ATHR136
ACYS221
VASP54
VILE56
VPRO57
VLYS103
VGLU105
VSER123
VTHR124
VSER125
VPRO131
VVAL132
VLEU134
VASP142

Functional Information from PROSITE/UniProt
site_idPS00253
Number of Residues21
DetailsINTERLEUKIN_1 Interleukin-1 signature. FeSAqfPnwYISTsqaenmpV
ChainResidueDetails
UPHE112-VAL132

site_idPS00290
Number of Residues7
DetailsIG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YICNVNH
ChainResidueDetails
HTYR199-HIS205
LTYR192-HIS198

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsSITE: Involved in receptor binding
ChainResidueDetails
UARG4
VARG4

site_idSWS_FT_FI2
Number of Residues10
DetailsSITE: Important for interaction with integrin => ECO:0000269|PubMed:29030430
ChainResidueDetails
ULYS55
VLYS88
ULYS63
ULYS65
ULYS74
ULYS88
VLYS55
VLYS63
VLYS65
VLYS74

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PDB entries from 2024-07-24

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