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5MVR

Crystal structure of Bacillus subtilus YdiB

Functional Information from GO Data
ChainGOidnamespacecontents
A0002949biological_processtRNA threonylcarbamoyladenosine modification
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0008033biological_processtRNA processing
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues15
Detailsbinding site for residue ADP A 201
ChainResidue
ATHR8
ATHR42
ATHR43
AARG132
AMG202
AHOH303
AHOH333
AASN10
APRO11
ATHR14
AASP36
AGLY38
AALA39
AGLY40
ALYS41

site_idAC2
Number of Residues3
Detailsbinding site for residue MG A 202
ChainResidue
ATHR42
AGLU106
AADP201

site_idAC3
Number of Residues3
Detailsbinding site for residue EDO A 203
ChainResidue
ALYS2
AGLN3
AHOH322

site_idAC4
Number of Residues1
Detailsbinding site for residue EDO A 204
ChainResidue
ASER-2

site_idAC5
Number of Residues1
Detailsbinding site for residue EDO A 205
ChainResidue
AGLN121

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
ATHR42
AGLU106
AASP130
AGLY38

221051

PDB entries from 2024-06-12

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