5MVR
Crystal structure of Bacillus subtilus YdiB
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-09-24 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.07252 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 68.590, 59.820, 39.340 |
Unit cell angles | 90.00, 110.09, 90.00 |
Refinement procedure
Resolution | 43.835 - 1.762 |
R-factor | 0.1816 |
Rwork | 0.180 |
R-free | 0.20910 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1htw |
RMSD bond length | 0.008 |
RMSD bond angle | 1.227 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 43.840 |
High resolution limit [Å] | 1.760 |
Rmerge | 0.032 |
Number of reflections | 14655 |
<I/σ(I)> | 16.5 |
Completeness [%] | 98.6 |
Redundancy | 3.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 42 % PEG600 and 200 mM Imidazole malate pH 5.5 |