Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

5MAC

Crystal structure of decameric Methanococcoides burtonii Rubisco complexed with 2-carboxyarabinitol bisphosphate

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000287	molecular_function	magnesium ion binding
A	0015977	biological_process	carbon fixation
A	0016829	molecular_function	lyase activity
A	0016984	molecular_function	ribulose-bisphosphate carboxylase activity
A	0046872	molecular_function	metal ion binding
B	0000287	molecular_function	magnesium ion binding
B	0015977	biological_process	carbon fixation
B	0016829	molecular_function	lyase activity
B	0016984	molecular_function	ribulose-bisphosphate carboxylase activity
B	0046872	molecular_function	metal ion binding
C	0000287	molecular_function	magnesium ion binding
C	0015977	biological_process	carbon fixation
C	0016829	molecular_function	lyase activity
C	0016984	molecular_function	ribulose-bisphosphate carboxylase activity
C	0046872	molecular_function	metal ion binding
D	0000287	molecular_function	magnesium ion binding
D	0015977	biological_process	carbon fixation
D	0016829	molecular_function	lyase activity
D	0016984	molecular_function	ribulose-bisphosphate carboxylase activity
D	0046872	molecular_function	metal ion binding
E	0000287	molecular_function	magnesium ion binding
E	0015977	biological_process	carbon fixation
E	0016829	molecular_function	lyase activity
E	0016984	molecular_function	ribulose-bisphosphate carboxylase activity
E	0046872	molecular_function	metal ion binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	27
Details	binding site for residue CAP A 501

Chain	Residue
A	ILE165
A	LYS330
A	SER399
A	GLY400
A	GLY401
A	GLY424
A	SER425
A	MG502
A	HOH602
A	HOH604
A	HOH606
A	LYS167
A	HOH607
A	HOH629
A	HOH632
A	HOH636
B	GLU57
B	THR62
B	ASN115
B	HOH642
A	LYS169
A	KCX193
A	ASP195
A	GLU196
A	HIS288
A	ARG289
A	HIS322

site_id	AC2
Number of Residues	5
Details	binding site for residue MG A 502

Chain	Residue
A	KCX193
A	ASP195
A	GLU196
A	CAP501
B	ASN115

site_id	AC3
Number of Residues	4
Details	binding site for residue MG A 503

Chain	Residue
A	ASP366
A	ASP368
B	GLU179
B	ASP183

site_id	AC4
Number of Residues	1
Details	binding site for residue CL A 504

Chain	Residue
A	LEU22

site_id	AC5
Number of Residues	26
Details	binding site for residue CAP B 501

Chain	Residue
A	GLU57
A	THR62
A	ASN115
B	ILE165
B	LYS167
B	LYS169
B	KCX193
B	ASP195
B	GLU196
B	HIS288
B	ARG289
B	HIS322
B	LYS330
B	MET331
B	SER399
B	GLY400
B	GLY401
B	GLY424
B	SER425
B	MG502
B	HOH606
B	HOH613
B	HOH614
B	HOH619
B	HOH626
B	HOH630

site_id	AC6
Number of Residues	6
Details	binding site for residue MG B 502

Chain	Residue
A	ASN115
B	LYS169
B	KCX193
B	ASP195
B	GLU196
B	CAP501

site_id	AC7
Number of Residues	5
Details	binding site for residue MG B 503

Chain	Residue
B	ASP366
B	ASP368
B	HOH674
D	GLU179
D	ASP183

site_id	AC8
Number of Residues	1
Details	binding site for residue CL B 504

Chain	Residue
B	LEU22

site_id	AC9
Number of Residues	25
Details	binding site for residue CAP C 501

Chain	Residue
D	HOH602
C	ILE165
C	LYS167
C	LYS169
C	KCX193
C	ASP195
C	GLU196
C	HIS288
C	ARG289
C	HIS322
C	LYS330
C	MET331
C	SER399
C	GLY400
C	GLY401
C	GLY424
C	SER425
C	MG502
C	HOH604
C	HOH606
C	HOH611
C	HOH622
C	HOH624
D	THR62
D	ASN115

site_id	AD1
Number of Residues	4
Details	binding site for residue MG C 502

Chain	Residue
C	KCX193
C	ASP195
C	GLU196
C	CAP501

site_id	AD2
Number of Residues	5
Details	binding site for residue MG C 503

Chain	Residue
A	GLU179
A	ASP183
C	ASP366
C	ASP368
C	HOH648

site_id	AD3
Number of Residues	1
Details	binding site for residue CL C 504

Chain	Residue
C	LEU22

site_id	AD4
Number of Residues	23
Details	binding site for residue CAP D 501

Chain	Residue
C	THR62
C	ASN115
D	ILE165
D	LYS167
D	LYS169
D	KCX193
D	ASP195
D	GLU196
D	HIS288
D	ARG289
D	HIS322
D	LYS330
D	MET331
D	SER399
D	GLY400
D	GLY401
D	GLY424
D	SER425
D	MG502
D	HOH606
D	HOH610
D	HOH614
D	HOH616

site_id	AD5
Number of Residues	6
Details	binding site for residue MG D 502

Chain	Residue
C	ASN115
D	LYS169
D	KCX193
D	ASP195
D	GLU196
D	CAP501

site_id	AD6
Number of Residues	5
Details	binding site for residue MG D 503

Chain	Residue
D	ASP366
D	ASP368
D	HOH623
E	GLU179
E	ASP183

site_id	AD7
Number of Residues	1
Details	binding site for residue CL D 504

Chain	Residue
D	LEU22

site_id	AD8
Number of Residues	22
Details	binding site for residue CAP E 501

Chain	Residue
E	GLU57
E	THR62
E	ASN115
E	ILE165
E	LYS167
E	LYS169
E	KCX193
E	ASP195
E	GLU196
E	HIS288
E	ARG289
E	HIS322
E	LYS330
E	MET331
E	SER399
E	GLY400
E	GLY401
E	GLY424
E	SER425
E	MG502
E	HOH606
E	HOH613

site_id	AD9
Number of Residues	4
Details	binding site for residue MG E 502

Chain	Residue
E	KCX193
E	ASP195
E	GLU196
E	CAP501

site_id	AE1
Number of Residues	5
Details	binding site for residue MG E 503

Chain	Residue
C	GLU179
C	ASP183
E	ASP366
E	ASP368
E	HOH612

site_id	AE2
Number of Residues	1
Details	binding site for residue CL E 504

Chain	Residue
E	LEU22

Functional Information from PROSITE/UniProt

site_id	PS00157
Number of Residues	9
Details	RUBISCO_LARGE Ribulose bisphosphate carboxylase large chain active site. GgDFvKnDE

Chain	Residue	Details
A	GLY188-GLU196

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)