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5M7V

Translation initiation factor 4E in complex with (RP)-m2(7,2'O)GppSpG mRNA 5' cap analog (beta-S-ARCA D1)

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
A0003743molecular_functiontranslation initiation factor activity
A0005737cellular_componentcytoplasm
A0006413biological_processtranslational initiation
B0003723molecular_functionRNA binding
B0003743molecular_functiontranslation initiation factor activity
B0005737cellular_componentcytoplasm
B0006413biological_processtranslational initiation
C0003723molecular_functionRNA binding
C0003743molecular_functiontranslation initiation factor activity
C0005737cellular_componentcytoplasm
C0006413biological_processtranslational initiation
D0003723molecular_functionRNA binding
D0003743molecular_functiontranslation initiation factor activity
D0005737cellular_componentcytoplasm
D0006413biological_processtranslational initiation
Functional Information from PDB Data
site_idAC1
Number of Residues12
Detailsbinding site for residue WZO A 300
ChainResidue
ATRP56
AHOH439
AHOH440
AHOH457
AMET101
ATRP102
AGLU103
AASP143
AARG157
ALYS162
AHOH421
AHOH432

site_idAC2
Number of Residues14
Detailsbinding site for residue WZO B 301
ChainResidue
BTRP56
BMET101
BTRP102
BGLU103
BASP143
BARG157
BLYS162
BHOH420
BHOH422
BHOH428
BHOH446
BHOH450
BHOH460
BHOH506

site_idAC3
Number of Residues6
Detailsbinding site for residue GOL B 302
ChainResidue
BILE115
BTHR116
BGLN121
BILE193
BHOH405
BHOH406

site_idAC4
Number of Residues5
Detailsbinding site for residue WZO C 300
ChainResidue
CTRP56
CMET101
CTRP102
CGLU103
CARG157

Functional Information from PROSITE/UniProt
site_idPS00813
Number of Residues24
DetailsIF4E Eukaryotic initiation factor 4E signature. DYslFKdgIePmWEDeknkrGGRW
ChainResidueDetails
AASP90-TRP113

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues16
DetailsBINDING: BINDING => ECO:0000269|PubMed:10394359, ECO:0000269|PubMed:9200613
ChainResidueDetails
ATRP56
CTRP102
CARG157
CTHR205
DTRP56
DTRP102
DARG157
DTHR205
ATRP102
AARG157
ATHR205
BTRP56
BTRP102
BARG157
BTHR205
CTRP56

site_idSWS_FT_FI2
Number of Residues4
DetailsMOD_RES: Phosphoserine; by PKC and MKNK2 => ECO:0000269|PubMed:17689282
ChainResidueDetails
ASER209
BSER209
CSER209
DSER209

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PDB entries from 2024-11-13

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