5M13
Synthetic nanobody in complex with MBP
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005515 | molecular_function | protein binding |
| A | 0006974 | biological_process | DNA damage response |
| A | 0008643 | biological_process | carbohydrate transport |
| A | 0015144 | molecular_function | carbohydrate transmembrane transporter activity |
| A | 0015768 | biological_process | maltose transport |
| A | 0016020 | cellular_component | membrane |
| A | 0030288 | cellular_component | outer membrane-bounded periplasmic space |
| A | 0034219 | biological_process | carbohydrate transmembrane transport |
| A | 0034289 | biological_process | detection of maltose stimulus |
| A | 0042597 | cellular_component | periplasmic space |
| A | 0042956 | biological_process | maltodextrin transmembrane transport |
| A | 0043190 | cellular_component | ATP-binding cassette (ABC) transporter complex |
| A | 0055052 | cellular_component | ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing |
| A | 0055085 | biological_process | transmembrane transport |
| A | 0060326 | biological_process | cell chemotaxis |
| A | 0071702 | biological_process | organic substance transport |
| A | 1901982 | molecular_function | maltose binding |
| A | 1990060 | cellular_component | maltose transport complex |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | binding site for residue EDO A 401 |
| Chain | Residue |
| A | ASP197 |
| A | LYS200 |
| A | VAL357 |
| A | HOH546 |
| A | HOH599 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | binding site for residue EDO A 402 |
| Chain | Residue |
| A | HOH752 |
| A | ASP164 |
| A | GLY187 |
| A | ALA190 |
| A | LYS251 |
| site_id | AC3 |
| Number of Residues | 9 |
| Details | binding site for residue EDO B 201 |
| Chain | Residue |
| B | ARG38 |
| B | GLN39 |
| B | ALA40 |
| B | LYS43 |
| B | GLU44 |
| B | GLU46 |
| B | EDO202 |
| B | HOH336 |
| B | HOH365 |
| site_id | AC4 |
| Number of Residues | 7 |
| Details | binding site for residue EDO B 202 |
| Chain | Residue |
| B | ARG38 |
| B | GLU46 |
| B | GLY47 |
| B | SER63 |
| B | EDO201 |
| B | HOH330 |
| B | HOH406 |
| site_id | AC5 |
| Number of Residues | 8 |
| Details | binding site for residue EDO B 203 |
| Chain | Residue |
| A | GLU44 |
| A | HOH639 |
| B | TRP110 |
| B | PHE111 |
| B | ARG113 |
| B | HOH302 |
| B | HOH305 |
| B | HOH321 |
| site_id | AC6 |
| Number of Residues | 7 |
| Details | binding site for residue EDO B 204 |
| Chain | Residue |
| A | TYR90 |
| A | MET321 |
| A | GLN325 |
| B | GLY10 |
| B | SER11 |
| B | HOH307 |
| B | HOH347 |
| site_id | AC7 |
| Number of Residues | 7 |
| Details | binding site for residue EDO B 205 |
| Chain | Residue |
| A | ASP41 |
| A | LYS42 |
| B | ARG45 |
| B | GLN109 |
| B | TRP115 |
| B | HOH312 |
| B | HOH320 |
Functional Information from PROSITE/UniProt
| site_id | PS01037 |
| Number of Residues | 18 |
| Details | SBP_BACTERIAL_1 Bacterial extracellular solute-binding proteins, family 1 signature. PIAvEalSLIYNkdlLpN |
| Chain | Residue | Details |
| A | PRO107-ASN124 |
