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5LWE

Crystal structure of the human CC chemokine receptor type 9 (CCR9) in complex with vercirnon

Functional Information from GO Data
ChainGOidnamespacecontents
A0004930molecular_functionG protein-coupled receptor activity
A0004950molecular_functionchemokine receptor activity
A0006935biological_processchemotaxis
A0006955biological_processimmune response
A0007186biological_processG protein-coupled receptor signaling pathway
A0016020cellular_componentmembrane
A0016493molecular_functionC-C chemokine receptor activity
B0004930molecular_functionG protein-coupled receptor activity
B0004950molecular_functionchemokine receptor activity
B0006935biological_processchemotaxis
B0006955biological_processimmune response
B0007186biological_processG protein-coupled receptor signaling pathway
B0016020cellular_componentmembrane
B0016493molecular_functionC-C chemokine receptor activity
Functional Information from PDB Data
site_idAC1
Number of Residues16
Detailsbinding site for residue 79K A 401
ChainResidue
AVAL69
AVAL259
ATYR317
AGLY321
AGLU322
AARG323
APHE324
AASP327
AARG78
ATHR81
ATHR83
AASP84
ALEU87
AARG144
AALA255
ATHR256

site_idAC2
Number of Residues2
Detailsbinding site for residue OLA A 402
ChainResidue
ALEU265
AOLA403

site_idAC3
Number of Residues3
Detailsbinding site for residue OLA A 403
ChainResidue
AHIS250
AOLA402
AOLA404

site_idAC4
Number of Residues8
Detailsbinding site for residue OLA A 404
ChainResidue
ATYR234
ATHR235
AILE238
ALEU241
AOLA403
BHIS239
BOLA404
BOLA405

site_idAC5
Number of Residues2
Detailsbinding site for residue OLA A 405
ChainResidue
ATYR145
AHIS239

site_idAC6
Number of Residues3
Detailsbinding site for residue OLA A 406
ChainResidue
ATRP74
ALEU96
AOLA408

site_idAC7
Number of Residues4
Detailsbinding site for residue OLA A 407
ChainResidue
ATRP56
APRO102
AILE106
BPRO53

site_idAC8
Number of Residues5
Detailsbinding site for residue OLA A 408
ChainResidue
ALEU96
AMET128
ATRP173
AOLA406
AOLA413

site_idAC9
Number of Residues3
Detailsbinding site for residue OLA A 409
ChainResidue
ALEU64
AOLA410
AOLA415

site_idAD1
Number of Residues3
Detailsbinding site for residue OLA A 411
ChainResidue
ATYR164
AMET167
BMET167

site_idAD2
Number of Residues3
Detailsbinding site for residue OLA A 412
ChainResidue
APHE319
AOLA410
ACLR417

site_idAD3
Number of Residues8
Detailsbinding site for residue OLA A 413
ChainResidue
ACYS169
APHE170
ATRP173
AALA177
AALA178
AILE181
AOLA408
BILE181

site_idAD4
Number of Residues3
Detailsbinding site for residue OLA A 414
ChainResidue
AASP143
AARG161
BTYR37

site_idAD5
Number of Residues2
Detailsbinding site for residue OLA A 415
ChainResidue
AILE70
AOLA409

site_idAD6
Number of Residues6
Detailsbinding site for residue OLA A 416
ChainResidue
ALEU68
ALEU328
ALEU335
AGLY336
AOLA410
BARG325

site_idAD7
Number of Residues2
Detailsbinding site for residue CLR A 417
ChainResidue
APHE308
AOLA412

site_idAD8
Number of Residues4
Detailsbinding site for residue MLI A 418
ChainResidue
AARG144
AALA147
AARG161
AARG323

site_idAD9
Number of Residues17
Detailsbinding site for residue 79K B 401
ChainResidue
BVAL69
BARG78
BTHR81
BTHR83
BASP84
BLEU87
BARG144
BALA252
BALA255
BTHR256
BVAL259
BTYR317
BGLY321
BGLU322
BARG323
BPHE324
BASP327

site_idAE1
Number of Residues1
Detailsbinding site for residue OLA B 402
ChainResidue
BLYS254

site_idAE2
Number of Residues8
Detailsbinding site for residue OLA B 403
ChainResidue
BVAL262
BLEU265
BSER266
BOLA404
BHIS250
BLYS254
BTHR258
BTHR261

site_idAE3
Number of Residues6
Detailsbinding site for residue OLA B 404
ChainResidue
AOLA404
BTYR234
BHIS250
BILE257
BOLA403
BOLA405

site_idAE4
Number of Residues4
Detailsbinding site for residue OLA B 405
ChainResidue
AHIS239
AOLA404
BHIS250
BOLA404

site_idAE5
Number of Residues6
Detailsbinding site for residue OLA B 406
ChainResidue
BPHE86
BMET138
BASP143
BILE146
BARG161
BLEU175

site_idAE6
Number of Residues4
Detailsbinding site for residue OLA B 407
ChainResidue
BTYR145
BPHE227
BTHR235
BOLA413

site_idAE7
Number of Residues2
Detailsbinding site for residue OLA B 408
ChainResidue
BPHE170
BOLA409

site_idAE8
Number of Residues4
Detailsbinding site for residue OLA B 409
ChainResidue
BTRP74
BMET85
BASN89
BOLA408

site_idAE9
Number of Residues1
Detailsbinding site for residue OLA B 410
ChainResidue
BILE92

site_idAF1
Number of Residues1
Detailsbinding site for residue OLA B 411
ChainResidue
BSER67

site_idAF2
Number of Residues1
Detailsbinding site for residue OLA B 413
ChainResidue
BOLA407

site_idAF3
Number of Residues5
Detailsbinding site for residue OLA B 414
ChainResidue
APHE285
BILE279
BALA283
BPHE285
BVAL291

site_idAF4
Number of Residues3
Detailsbinding site for residue MLI B 415
ChainResidue
BARG144
BALA147
BARG161

site_idAF5
Number of Residues9
Detailsbinding site for residues OLA A 410 and OLA B 412
ChainResidue
ALEU64
APHE319
APHE319
ASER339
AOLA409
AOLA416
ACLR417
BLEU64
BILE92

Functional Information from PROSITE/UniProt
site_idPS00237
Number of Residues17
DetailsG_PROTEIN_RECEP_F1_1 G-protein coupled receptors family 1 signature. SCVlLIMCICVDRYIaI
ChainResidueDetails
ASER132-ILE148

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues50
DetailsTransmembrane: {"description":"Helical; Name=1","evidences":[{"source":"PubMed","id":"27926729","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues44
DetailsTopological domain: {"description":"Cytoplasmic","evidences":[{"source":"PubMed","id":"27926729","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues58
DetailsTransmembrane: {"description":"Helical; Name=3","evidences":[{"source":"PubMed","id":"27926729","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues50
DetailsTransmembrane: {"description":"Helical; Name=4","evidences":[{"source":"PubMed","id":"27926729","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues68
DetailsTransmembrane: {"description":"Helical; Name=5","evidences":[{"source":"PubMed","id":"27926729","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues68
DetailsTransmembrane: {"description":"Helical; Name=6","evidences":[{"source":"PubMed","id":"27926729","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues12
DetailsTopological domain: {"description":"Extracellular","evidences":[{"source":"PubMed","id":"27926729","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues60
DetailsTransmembrane: {"description":"Helical; Name=7","evidences":[{"source":"PubMed","id":"27926729","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI9
Number of Residues23
DetailsTransmembrane: {"description":"Helical; Name=2","evidences":[{"source":"PubMed","id":"27926729","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI10
Number of Residues1
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

247536

PDB entries from 2026-01-14

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