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5LW9

Crystal structure of human JARID1B in complex with S40563a

Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 801
ChainResidue
ACYS692
ACYS695
ACYS715
AHIS718

site_idAC2
Number of Residues5
Detailsbinding site for residue MN A 802
ChainResidue
ALEU90
AASN91
ALEU413
ATHR416
AGLU419

site_idAC3
Number of Residues6
Detailsbinding site for residue EDO A 803
ChainResidue
AASP630
ACYS699
APHE700
AMET701
ASER702
AHOH914

site_idAC4
Number of Residues2
Detailsbinding site for residue EDO A 804
ChainResidue
AGLY524
AARG584

site_idAC5
Number of Residues7
Detailsbinding site for residue DMS A 805
ChainResidue
ATRP504
AGLU531
AARG584
AHIS617
ATYR618
ALEU621
AARG623

site_idAC6
Number of Residues8
Detailsbinding site for residue DMS A 806
ChainResidue
ATRP486
ATYR488
AGLU501
ASER507
AALA599
AVAL600
AASN601
A5UJ808

site_idAC7
Number of Residues5
Detailsbinding site for residue DMS A 807
ChainResidue
AARG98
ACYS497
AHIS499
A5UJ808
AHOH959

site_idAC8
Number of Residues17
Detailsbinding site for residue 5UJ A 808
ChainResidue
ATYR425
AASP428
AGLY481
ATRP486
ATYR488
APHE496
AHIS499
AGLU501
AASN509
ALYS517
ATRP519
AHIS587
ADMS806
ADMS807
AMN809
AHOH902
AHOH956

site_idAC9
Number of Residues5
Detailsbinding site for residue MN A 809
ChainResidue
AHIS499
AGLU501
AHIS587
A5UJ808
AHOH956

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues52
DetailsZN_FING: C5HC2 => ECO:0000269|PubMed:26741168, ECO:0000269|PubMed:27214403, ECO:0000269|PubMed:28262558
ChainResidueDetails
ACYS692-MET744

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P29375
ChainResidueDetails
ATYR425
ASER507
AASN509
ALYS517

site_idSWS_FT_FI3
Number of Residues3
DetailsBINDING: BINDING => ECO:0000305|PubMed:26741168, ECO:0000305|PubMed:27214403, ECO:0000305|PubMed:28262558
ChainResidueDetails
AHIS499
AGLU501
AHIS587

site_idSWS_FT_FI4
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:25755297, ECO:0007744|PubMed:28112733
ChainResidueDetails
ALYS769

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PDB entries from 2024-07-17

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