5LPK
Crystal structure of the bromodomain of human EP300 bound to the inhibitor XDM1
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004402 | molecular_function | histone acetyltransferase activity |
A | 0006355 | biological_process | regulation of DNA-templated transcription |
B | 0004402 | molecular_function | histone acetyltransferase activity |
B | 0006355 | biological_process | regulation of DNA-templated transcription |
C | 0004402 | molecular_function | histone acetyltransferase activity |
C | 0006355 | biological_process | regulation of DNA-templated transcription |
D | 0004402 | molecular_function | histone acetyltransferase activity |
D | 0006355 | biological_process | regulation of DNA-templated transcription |
E | 0004402 | molecular_function | histone acetyltransferase activity |
E | 0006355 | biological_process | regulation of DNA-templated transcription |
F | 0004402 | molecular_function | histone acetyltransferase activity |
F | 0006355 | biological_process | regulation of DNA-templated transcription |
G | 0004402 | molecular_function | histone acetyltransferase activity |
G | 0006355 | biological_process | regulation of DNA-templated transcription |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 11 |
Details | binding site for residue XDM A 1201 |
Chain | Residue |
A | PRO1074 |
A | HOH1346 |
C | LEU1073 |
A | PHE1075 |
A | VAL1079 |
A | TYR1131 |
A | ASN1132 |
A | ARG1137 |
A | EDO1208 |
A | HOH1304 |
A | HOH1339 |
site_id | AC2 |
Number of Residues | 2 |
Details | binding site for residue SO4 A 1202 |
Chain | Residue |
A | ARG1067 |
C | GLN1082 |
site_id | AC3 |
Number of Residues | 7 |
Details | binding site for residue SO4 A 1203 |
Chain | Residue |
A | ARG1133 |
A | LYS1134 |
A | THR1135 |
A | HOH1312 |
A | HOH1324 |
A | HOH1340 |
B | LYS1134 |
site_id | AC4 |
Number of Residues | 6 |
Details | binding site for residue EDO A 1204 |
Chain | Residue |
A | ARG1055 |
A | HOH1318 |
C | GLN1082 |
D | GLU1052 |
D | ASP1107 |
D | GLY1109 |
site_id | AC5 |
Number of Residues | 4 |
Details | binding site for residue EDO A 1205 |
Chain | Residue |
A | LYS1134 |
A | TYR1139 |
A | HOH1303 |
B | PG41208 |
site_id | AC6 |
Number of Residues | 4 |
Details | binding site for residue EDO A 1206 |
Chain | Residue |
A | ASP1069 |
A | HOH1310 |
A | HOH1359 |
C | ARG1137 |
site_id | AC7 |
Number of Residues | 6 |
Details | binding site for residue EDO A 1207 |
Chain | Residue |
A | ILE1092 |
A | VAL1093 |
A | LYS1094 |
A | SER1095 |
A | ASN1127 |
B | GLY1085 |
site_id | AC8 |
Number of Residues | 5 |
Details | binding site for residue EDO A 1208 |
Chain | Residue |
A | ARG1137 |
A | XDM1201 |
A | HOH1329 |
A | HOH1339 |
B | ASN1126 |
site_id | AC9 |
Number of Residues | 10 |
Details | binding site for residue XDM B 1201 |
Chain | Residue |
B | LEU1073 |
B | PRO1074 |
B | PHE1075 |
B | LEU1084 |
B | ILE1086 |
B | TYR1131 |
B | ASN1132 |
B | ARG1137 |
B | HOH1319 |
B | HOH1344 |
site_id | AD1 |
Number of Residues | 6 |
Details | binding site for residue EDO B 1202 |
Chain | Residue |
A | ASP1119 |
A | TRP1122 |
B | SER1136 |
B | ARG1137 |
B | VAL1138 |
B | EDO1203 |
site_id | AD2 |
Number of Residues | 6 |
Details | binding site for residue EDO B 1203 |
Chain | Residue |
A | TRP1122 |
B | ASN1132 |
B | ARG1133 |
B | SER1136 |
B | EDO1202 |
B | HOH1310 |
site_id | AD3 |
Number of Residues | 6 |
Details | binding site for residue EDO B 1204 |
Chain | Residue |
B | PRO1081 |
B | ILE1086 |
B | PRO1087 |
B | ASP1088 |
B | TYR1089 |
B | PHE1090 |
site_id | AD4 |
Number of Residues | 3 |
Details | binding site for residue EDO B 1205 |
Chain | Residue |
A | TRP1115 |
A | GLY1161 |
B | GLU1071 |
site_id | AD5 |
Number of Residues | 4 |
Details | binding site for residue EDO B 1206 |
Chain | Residue |
B | ARG1067 |
B | GLN1068 |
B | ASP1069 |
B | HOH1313 |
site_id | AD6 |
Number of Residues | 2 |
Details | binding site for residue EDO B 1207 |
Chain | Residue |
B | GLN1068 |
B | LYS1144 |
site_id | AD7 |
Number of Residues | 10 |
Details | binding site for residue PG4 B 1208 |
Chain | Residue |
A | TRP1129 |
A | TYR1139 |
A | SER1143 |
A | EDO1205 |
B | ILE1092 |
B | LEU1130 |
B | TYR1131 |
B | ARG1133 |
B | HOH1307 |
B | HOH1353 |
site_id | AD8 |
Number of Residues | 13 |
Details | binding site for residue XDM C 1201 |
Chain | Residue |
C | TYR1131 |
C | ASN1132 |
C | ARG1137 |
C | HOH1306 |
C | HOH1308 |
C | HOH1354 |
A | TYR1066 |
A | ARG1076 |
A | GLN1077 |
C | LEU1073 |
C | PRO1074 |
C | VAL1079 |
C | LEU1084 |
site_id | AD9 |
Number of Residues | 5 |
Details | binding site for residue SO4 C 1202 |
Chain | Residue |
C | ARG1133 |
C | LYS1134 |
C | HOH1334 |
C | HOH1357 |
E | ARG1133 |
site_id | AE1 |
Number of Residues | 5 |
Details | binding site for residue EDO C 1203 |
Chain | Residue |
C | TYR1139 |
E | ARG1133 |
E | LYS1134 |
E | THR1135 |
E | SO41203 |
site_id | AE2 |
Number of Residues | 10 |
Details | binding site for residue XDM D 1201 |
Chain | Residue |
D | PRO1074 |
D | VAL1079 |
D | LEU1084 |
D | ILE1086 |
D | TYR1131 |
D | ASN1132 |
D | ARG1137 |
D | HOH1305 |
D | HOH1335 |
F | LEU1073 |
site_id | AE3 |
Number of Residues | 3 |
Details | binding site for residue EDO D 1203 |
Chain | Residue |
D | GLU1071 |
D | LYS1144 |
E | TRP1115 |
site_id | AE4 |
Number of Residues | 7 |
Details | binding site for residue EDO D 1204 |
Chain | Residue |
A | ARG1104 |
A | ASP1107 |
A | THR1108 |
A | HOH1305 |
D | ARG1104 |
D | ASP1107 |
D | HOH1301 |
site_id | AE5 |
Number of Residues | 12 |
Details | binding site for residue XDM E 1201 |
Chain | Residue |
E | PRO1074 |
E | VAL1079 |
E | LEU1084 |
E | TYR1089 |
E | TYR1131 |
E | ASN1132 |
E | ARG1137 |
E | VAL1138 |
E | HOH1301 |
E | HOH1312 |
E | HOH1340 |
G | LEU1073 |
site_id | AE6 |
Number of Residues | 11 |
Details | binding site for residue XDM E 1202 |
Chain | Residue |
E | ARG1076 |
E | GLN1077 |
E | HOH1334 |
E | HOH1337 |
G | PRO1074 |
G | LEU1084 |
G | TYR1089 |
G | TYR1131 |
G | ASN1132 |
G | ARG1137 |
G | HOH1321 |
site_id | AE7 |
Number of Residues | 5 |
Details | binding site for residue SO4 E 1203 |
Chain | Residue |
C | EDO1203 |
E | ARG1133 |
E | LYS1134 |
E | HOH1315 |
F | ARG1133 |
site_id | AE8 |
Number of Residues | 3 |
Details | binding site for residue EDO E 1204 |
Chain | Residue |
E | LYS1140 |
E | SER1143 |
E | HOH1322 |
site_id | AE9 |
Number of Residues | 12 |
Details | binding site for residue XDM F 1201 |
Chain | Residue |
D | ARG1076 |
D | GLN1077 |
D | HOH1342 |
F | LEU1073 |
F | PRO1074 |
F | VAL1079 |
F | LEU1084 |
F | TYR1089 |
F | TYR1131 |
F | ASN1132 |
F | ARG1137 |
F | HOH1304 |
site_id | AF1 |
Number of Residues | 5 |
Details | binding site for residue SO4 F 1202 |
Chain | Residue |
E | LYS1134 |
E | HOH1307 |
F | ARG1133 |
F | LYS1134 |
F | HOH1316 |
site_id | AF2 |
Number of Residues | 5 |
Details | binding site for residue EDO F 1203 |
Chain | Residue |
F | ILE1092 |
F | VAL1093 |
F | LYS1094 |
F | SER1095 |
F | ASN1127 |
site_id | AF3 |
Number of Residues | 1 |
Details | binding site for residue EDO F 1204 |
Chain | Residue |
F | TYR1139 |
site_id | AF4 |
Number of Residues | 1 |
Details | binding site for residue EDO G 1201 |
Chain | Residue |
G | HOH1333 |
Functional Information from PROSITE/UniProt
site_id | PS00633 |
Number of Residues | 60 |
Details | BROMODOMAIN_1 Bromodomain signature. SlpFrqpvDpqllgipDYFdiVkspMdlstIkrkldtgq..Yqepwqyvddiwl.MfnNAwlY |
Chain | Residue | Details |
A | SER1072-TYR1131 |