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5LPG

Structure of NUDT15 in complex with 6-thio-GMP

Functional Information from GO Data
ChainGOidnamespacecontents
A0000278biological_processmitotic cell cycle
A0000302biological_processresponse to reactive oxygen species
A0005515molecular_functionprotein binding
A0005829cellular_componentcytosol
A0006195biological_processpurine nucleotide catabolic process
A0006203biological_processdGTP catabolic process
A0008413molecular_function8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity
A0009217biological_processpurine deoxyribonucleoside triphosphate catabolic process
A0016787molecular_functionhydrolase activity
A0035539molecular_function8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity
A0042178biological_processxenobiotic catabolic process
A0042262biological_processDNA protection
A0044715molecular_function8-oxo-dGDP phosphatase activity
A0046872molecular_functionmetal ion binding
A0047429molecular_functionnucleoside triphosphate diphosphatase activity
A0055086biological_processnucleobase-containing small molecule metabolic process
A0061136biological_processregulation of proteasomal protein catabolic process
A1901292biological_processnucleoside phosphate catabolic process
B0000278biological_processmitotic cell cycle
B0000302biological_processresponse to reactive oxygen species
B0005515molecular_functionprotein binding
B0005829cellular_componentcytosol
B0006195biological_processpurine nucleotide catabolic process
B0006203biological_processdGTP catabolic process
B0008413molecular_function8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity
B0009217biological_processpurine deoxyribonucleoside triphosphate catabolic process
B0016787molecular_functionhydrolase activity
B0035539molecular_function8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity
B0042178biological_processxenobiotic catabolic process
B0042262biological_processDNA protection
B0044715molecular_function8-oxo-dGDP phosphatase activity
B0046872molecular_functionmetal ion binding
B0047429molecular_functionnucleoside triphosphate diphosphatase activity
B0055086biological_processnucleobase-containing small molecule metabolic process
B0061136biological_processregulation of proteasomal protein catabolic process
B1901292biological_processnucleoside phosphate catabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue MG A 1101
ChainResidue
AGLY47
AGLU63
AGLU67
AHOH1210
AHOH1211
AHOH1228
AHOH1263

site_idAC2
Number of Residues13
Detailsbinding site for residue 71V A 1102
ChainResidue
APRO46
AGLY47
AGLY48
AHIS49
ATYR90
APHE135
AGLY137
ALEU138
AHOH1211
AHOH1218
AHOH1227
AARG34
ALEU45

site_idAC3
Number of Residues9
Detailsbinding site for residue MG B 1101
ChainResidue
BGLU63
BGLU67
BMG1102
BMG1103
BMG1104
BHOH1209
BHOH1215
BHOH1230
BHOH1267

site_idAC4
Number of Residues8
Detailsbinding site for residue MG B 1102
ChainResidue
BGLY47
BGLU67
BMG1101
BMG1103
BHOH1215
BHOH1227
BHOH1254
BHOH1257

site_idAC5
Number of Residues8
Detailsbinding site for residue MG B 1103
ChainResidue
BGLY48
BMG1101
BMG1102
BMG1104
BHOH1215
BHOH1243
BHOH1264
BHOH1283

site_idAC6
Number of Residues8
Detailsbinding site for residue MG B 1104
ChainResidue
AHOH1271
BGLU63
BMG1101
BMG1103
BHOH1214
BHOH1220
BHOH1243
BHOH1267

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AGLU63
AGLU67
BGLU63
BGLU67

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PDB entries from 2024-06-12

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