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5LCD

Structure of Polyphosphate Kinase from Meiothermus ruber bound to AMP

Functional Information from GO Data
ChainGOidnamespacecontents
A0006797biological_processpolyphosphate metabolic process
A0008976molecular_functionpolyphosphate kinase activity
A0016776molecular_functionphosphotransferase activity, phosphate group as acceptor
B0006797biological_processpolyphosphate metabolic process
B0008976molecular_functionpolyphosphate kinase activity
B0016776molecular_functionphosphotransferase activity, phosphate group as acceptor
C0006797biological_processpolyphosphate metabolic process
C0008976molecular_functionpolyphosphate kinase activity
C0016776molecular_functionphosphotransferase activity, phosphate group as acceptor
D0006797biological_processpolyphosphate metabolic process
D0008976molecular_functionpolyphosphate kinase activity
D0016776molecular_functionphosphotransferase activity, phosphate group as acceptor
Functional Information from PDB Data
site_idAC1
Number of Residues10
Detailsbinding site for residue AMP A 301
ChainResidue
APHE91
AVAL131
AGLY92
AVAL93
APRO94
AARG106
AARG122
AGLU126
AASP127
AVAL130

site_idAC2
Number of Residues7
Detailsbinding site for residue PO4 A 302
ChainResidue
AALA67
AGLY68
AGLY69
ALYS70
AASP71
AARG182
ASO4306

site_idAC3
Number of Residues3
Detailsbinding site for residue SO4 A 303
ChainResidue
AGLN97
AARG101
BARG113

site_idAC4
Number of Residues3
Detailsbinding site for residue SO4 A 304
ChainResidue
ALYS29
AASN232
ATRP233

site_idAC5
Number of Residues5
Detailsbinding site for residue SO4 A 305
ChainResidue
ALYS231
ATRP233
AHOH416
BLYS231
BSO4304

site_idAC6
Number of Residues5
Detailsbinding site for residue SO4 A 306
ChainResidue
AARG75
AARG182
ALYS188
ALYS191
APO4302

site_idAC7
Number of Residues11
Detailsbinding site for residue AMP B 301
ChainResidue
BPHE91
BGLY92
BVAL93
BPRO94
BARG106
BARG122
BGLU126
BASP127
BVAL130
BVAL131
BHOH416

site_idAC8
Number of Residues7
Detailsbinding site for residue PO4 B 302
ChainResidue
BALA67
BGLY68
BGLY69
BLYS70
BASP71
BARG182
BSO4303

site_idAC9
Number of Residues4
Detailsbinding site for residue SO4 B 303
ChainResidue
BARG75
BLYS188
BLYS191
BPO4302

site_idAD1
Number of Residues3
Detailsbinding site for residue SO4 B 304
ChainResidue
ASO4305
BLYS231
BTRP233

site_idAD2
Number of Residues4
Detailsbinding site for residue SO4 B 305
ChainResidue
BLYS29
BLYS231
BASN232
BTRP233

site_idAD3
Number of Residues12
Detailsbinding site for residue AMP C 301
ChainResidue
CPHE91
CGLY92
CVAL93
CPRO94
CARG106
CARG122
CGLU126
CASP127
CVAL130
CVAL131
CARG193
CMG302

site_idAD4
Number of Residues2
Detailsbinding site for residue MG C 302
ChainResidue
CARG122
CAMP301

site_idAD5
Number of Residues7
Detailsbinding site for residue PO4 C 303
ChainResidue
CALA67
CGLY68
CGLY69
CLYS70
CASP71
CARG182
CSO4304

site_idAD6
Number of Residues5
Detailsbinding site for residue SO4 C 304
ChainResidue
CARG75
CARG182
CLYS188
CLYS191
CPO4303

site_idAD7
Number of Residues3
Detailsbinding site for residue SO4 C 305
ChainResidue
CARG132
CALA212
CARG215

site_idAD8
Number of Residues10
Detailsbinding site for residue AMP D 301
ChainResidue
DVAL130
DVAL131
DPHE91
DGLY92
DVAL93
DPRO94
DARG106
DARG122
DGLU126
DASP127

site_idAD9
Number of Residues6
Detailsbinding site for residue PO4 D 302
ChainResidue
DALA67
DGLY68
DGLY69
DLYS70
DASP71
DARG182

site_idAE1
Number of Residues3
Detailsbinding site for residue SO4 D 303
ChainResidue
CARG113
DGLN97
DARG101

223790

PDB entries from 2024-08-14

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