5L83
Complex of potato ATG8 protein with a peptide from Irish potato famine pathogen effector protein PexRD54
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000045 | biological_process | autophagosome assembly |
| A | 0000421 | cellular_component | autophagosome membrane |
| A | 0005515 | molecular_function | protein binding |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005773 | cellular_component | vacuole |
| A | 0005776 | cellular_component | autophagosome |
| A | 0005856 | cellular_component | cytoskeleton |
| A | 0006914 | biological_process | autophagy |
| A | 0006995 | biological_process | cellular response to nitrogen starvation |
| A | 0008429 | molecular_function | phosphatidylethanolamine binding |
| A | 0009705 | cellular_component | plant-type vacuole membrane |
| A | 0016020 | cellular_component | membrane |
| A | 0031410 | cellular_component | cytoplasmic vesicle |
| A | 0050832 | biological_process | defense response to fungus |
| A | 0097352 | biological_process | autophagosome maturation |
| B | 0000045 | biological_process | autophagosome assembly |
| B | 0000421 | cellular_component | autophagosome membrane |
| B | 0005515 | molecular_function | protein binding |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005773 | cellular_component | vacuole |
| B | 0005776 | cellular_component | autophagosome |
| B | 0005856 | cellular_component | cytoskeleton |
| B | 0006914 | biological_process | autophagy |
| B | 0006995 | biological_process | cellular response to nitrogen starvation |
| B | 0008429 | molecular_function | phosphatidylethanolamine binding |
| B | 0009705 | cellular_component | plant-type vacuole membrane |
| B | 0016020 | cellular_component | membrane |
| B | 0031410 | cellular_component | cytoplasmic vesicle |
| B | 0050832 | biological_process | defense response to fungus |
| B | 0097352 | biological_process | autophagosome maturation |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 6 |
| Details | binding site for residue SO4 A 201 |
| Chain | Residue |
| A | GLY3 |
| A | ARG15 |
| A | HOH302 |
| A | HOH313 |
| A | HOH389 |
| A | HOH391 |
| site_id | AC2 |
| Number of Residues | 3 |
| Details | binding site for residue SO4 A 202 |
| Chain | Residue |
| A | ARG23 |
| A | HOH325 |
| A | HOH390 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | binding site for residue SO4 A 203 |
| Chain | Residue |
| A | PRO43 |
| A | LYS70 |
| A | LEU71 |
| A | SER72 |
| A | LYS75 |
| site_id | AC4 |
| Number of Residues | 8 |
| Details | binding site for residue SO4 A 204 |
| Chain | Residue |
| A | VAL58 |
| A | PHE78 |
| A | ILE79 |
| A | PRO86 |
| A | THR88 |
| A | HOH335 |
| A | HOH337 |
| A | HOH355 |
| site_id | AC5 |
| Number of Residues | 6 |
| Details | binding site for residue EDO A 205 |
| Chain | Residue |
| A | ARG23 |
| A | PRO27 |
| A | SER93 |
| A | GLU97 |
| A | HOH373 |
| A | HOH395 |
| site_id | AC6 |
| Number of Residues | 4 |
| Details | binding site for residue SO4 B 201 |
| Chain | Residue |
| B | LYS47 |
| B | LYS48 |
| B | LYS49 |
| C | ASP1 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | binding site for residue SO4 B 202 |
| Chain | Residue |
| B | ARG21 |
| B | LYS25 |
| C | ASP1 |
| C | TRP2 |
| site_id | AC8 |
| Number of Residues | 5 |
| Details | binding site for residue SO4 B 203 |
| Chain | Residue |
| A | HOH309 |
| B | TYR63 |
| B | LYS70 |
| B | HOH336 |
| B | HOH361 |
| site_id | AC9 |
| Number of Residues | 8 |
| Details | binding site for residue EDO B 204 |
| Chain | Residue |
| A | ASN83 |
| A | ILE84 |
| B | VAL62 |
| B | PHE78 |
| B | ILE79 |
| B | LEU85 |
| B | HOH302 |
| B | HOH316 |
| site_id | AD1 |
| Number of Residues | 2 |
| Details | binding site for residue EDO B 205 |
| Chain | Residue |
| B | HIS10 |
| B | ARG14 |
