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5L7F

Crystal structure of MMP12 mutant K421A in complex with RXP470.1 conjugated with fluorophore Cy5,5 in space group P21.

Functional Information from GO Data
ChainGOidnamespacecontents
A0004222molecular_functionmetalloendopeptidase activity
A0006508biological_processproteolysis
A0008237molecular_functionmetallopeptidase activity
A0008270molecular_functionzinc ion binding
A0031012cellular_componentextracellular matrix
B0004222molecular_functionmetalloendopeptidase activity
B0006508biological_processproteolysis
B0008237molecular_functionmetallopeptidase activity
B0008270molecular_functionzinc ion binding
B0031012cellular_componentextracellular matrix
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 301
ChainResidue
AHIS218
AHIS222
AHIS228
AR47309

site_idAC2
Number of Residues4
Detailsbinding site for residue ZN A 302
ChainResidue
AHIS168
AASP170
AHIS183
AHIS196

site_idAC3
Number of Residues6
Detailsbinding site for residue CA A 303
ChainResidue
AGLY176
AGLY178
AILE180
AASP198
AGLU201
AASP175

site_idAC4
Number of Residues6
Detailsbinding site for residue CA A 304
ChainResidue
AASP158
AGLY190
AGLY192
AASP194
AHOH436
AHOH446

site_idAC5
Number of Residues5
Detailsbinding site for residue CA A 305
ChainResidue
AASP124
AGLU199
AGLU201
AHOH532
AHOH533

site_idAC6
Number of Residues3
Detailsbinding site for residue EDO A 307
ChainResidue
AGLY209
ATHR210
AR47309

site_idAC7
Number of Residues3
Detailsbinding site for residue EDO A 308
ChainResidue
APRO123
AMET125
AASN126

site_idAC8
Number of Residues4
Detailsbinding site for residue ZN B 302
ChainResidue
BHIS218
BHIS222
BHIS228
BR47307

site_idAC9
Number of Residues4
Detailsbinding site for residue ZN B 303
ChainResidue
BHIS168
BASP170
BHIS183
BHIS196

site_idAD1
Number of Residues6
Detailsbinding site for residue CA B 304
ChainResidue
BASP175
BGLY176
BGLY178
BILE180
BASP198
BGLU201

site_idAD2
Number of Residues6
Detailsbinding site for residue CA B 305
ChainResidue
BASP158
BGLY190
BGLY192
BASP194
BHOH430
BHOH449

site_idAD3
Number of Residues5
Detailsbinding site for residue CA B 306
ChainResidue
BASP124
BGLU199
BGLU201
BHOH531
BHOH540

site_idAD4
Number of Residues3
Detailsbinding site for residue EDO B 308
ChainResidue
ASER229
BSER229
BSER230

site_idAD5
Number of Residues5
Detailsbinding site for residue GOL B 309
ChainResidue
BLEU181
BGLY209
BTHR210
BTYR240
BR47307

site_idAD6
Number of Residues4
Detailsbinding site for residue DMS B 310
ChainResidue
BHIS183
BALA184
BPHE185
BR47307

site_idAD7
Number of Residues44
Detailsbinding site for residues 6PJ A 306 and R47 B 306
ChainResidue
BPHE237
BPRO238
BTHR239
BTYR240
BALA241
BVAL243
BZN302
BGOL309
BDMS310
BHOH443
BHOH464
BHOH472
BHOH507
ASER230
APRO232
ALYS233
ATYR242
AVAL243
AARG249
ASER251
AALA252
BHOH401
BHOH407
BHOH414
BHOH422
BHOH459
BHOH463
AHOH475
BARG110
BLYS111
BGLY178
BGLY179
BILE180
BLEU181
BALA182
BTHR215
BHIS218
BGLU219
BHIS222
BHIS228
BPRO232
BLYS233
BALA234
BVAL235

site_idAD8
Number of Residues55
Detailsbinding site for residues R47 A 310 and 6PJ B 309
ChainResidue
AVAL108
ATRP109
AARG110
APRO123
AMET125
AASN126
AGLY179
AILE180
ALEU181
AALA182
APRO187
AGLY188
ASER189
ATHR215
AHIS218
AGLU219
AHIS222
AHIS228
APRO232
ALYS233
AALA234
AVAL235
APHE237
APRO238
ATHR239
ATYR240
AALA241
AVAL243
AZN301
AEDO307
AHOH412
AHOH414
AHOH455
AHOH458
AHOH498
AHOH518
AHOH523
BHIS183
BALA184
BPHE185
BSER230
BPRO232
BLYS233
BTHR247
BPHE248
BARG249
BSER251
BALA252
BR47307
BHOH404
AHOH402
AHOH421
AHOH438
AHOH468
AHOH486

Functional Information from PROSITE/UniProt
site_idPS00142
Number of Residues10
DetailsZINC_PROTEASE Neutral zinc metallopeptidases, zinc-binding region signature. TAVHEIGHSL
ChainResidueDetails
ATHR215-LEU224

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE:
ChainResidueDetails
AGLU219
BGLU219

site_idSWS_FT_FI2
Number of Residues38
DetailsBINDING:
ChainResidueDetails
AASP124
AGLY190
AGLY192
AASP194
AHIS196
AASP198
AGLU199
AGLU201
AHIS218
AHIS222
AHIS228
AASP158
BASP124
BASP158
BHIS168
BASP170
BASP175
BGLY176
BGLY178
BILE180
BHIS183
BGLY190
AHIS168
BGLY192
BASP194
BHIS196
BASP198
BGLU199
BGLU201
BHIS218
BHIS222
BHIS228
AASP170
AASP175
AGLY176
AGLY178
AILE180
AHIS183

237735

PDB entries from 2025-06-18

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