Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5KFI

Human DNA polymerase eta-DNA ternary complex: reaction with 10 mM Mn2+ for 120s

Functional Information from GO Data
ChainGOidnamespacecontents
A0003684molecular_functiondamaged DNA binding
A0006281biological_processDNA repair
Functional Information from PDB Data
site_idAC1
Number of Residues9
Detailsbinding site for residue MN A 501
ChainResidue
AASP13
AASP115
AGLU116
ACA502
AMN503
ADTP507
AHOH780
PDT8
PDA9

site_idAC2
Number of Residues7
Detailsbinding site for residue CA A 502
ChainResidue
AASP13
AMET14
AASP115
AMN501
ADTP507
ADPO508
PDA9

site_idAC3
Number of Residues7
Detailsbinding site for residue MN A 503
ChainResidue
AASP13
AMET14
AASP115
AMN501
ADTP507
ADPO508
PDA9

site_idAC4
Number of Residues10
Detailsbinding site for residue GOL A 504
ChainResidue
AARG24
APRO244
APHE247
ASER248
AGLY276
AGLU277
AHOH647
AHOH715
AHOH721
AHOH793

site_idAC5
Number of Residues9
Detailsbinding site for residue GOL A 505
ChainResidue
AGLU94
AALA95
AGLU98
AARG303
AHOH645
AHOH661
AHOH673
AHOH685
AHOH834

site_idAC6
Number of Residues8
Detailsbinding site for residue GOL A 506
ChainResidue
AASN26
APRO27
AGLY271
AGLU273
ATYR274
AGLU277
AHOH614
AHOH691

site_idAC7
Number of Residues32
Detailsbinding site for residue DTP A 507
ChainResidue
AASP13
AMET14
AASP15
ACYS16
APHE17
APHE18
AILE48
AALA49
ATYR52
AARG55
AARG61
AASP115
ALYS231
AMN501
ACA502
AMN503
ADPO508
AHOH618
AHOH650
AHOH653
AHOH780
AHOH791
AHOH796
PDT8
PDA9
PMN101
PHOH203
PHOH207
PHOH222
TDT3
TDT4
TDA5

site_idAC8
Number of Residues18
Detailsbinding site for residue DPO A 508
ChainResidue
PMN101
AASP13
AMET14
AASP15
ACYS16
APHE17
ATYR52
AARG55
AARG61
AASP115
ALYS231
ACA502
AMN503
ADTP507
AHOH618
AHOH653
AHOH796
PDA9

site_idAC9
Number of Residues8
Detailsbinding site for residue MN P 101
ChainResidue
AARG61
ADTP507
ADPO508
AHOH618
AHOH650
AHOH796
PDA9
PHOH222

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:27284197, ECO:0007744|PDB:5KFO
ChainResidueDetails
AASP13
AMET14
AASP115
AGLU116

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:27284197
ChainResidueDetails
AARG61

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon